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SCNpilot_BF_INOC_scaffold_12175_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(1..1260)

Top 3 Functional Annotations

Value Algorithm Source
trbI; Conjugative transfer protein TrbI; K03195 type IV secretion system protein VirB10 id=12498576 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 420.0
  • Bit_score: 757
  • Evalue 7.40e-216
trbI; Conjugative transfer protein TrbI; K03195 type IV secretion system protein VirB10 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 422.0
  • Bit_score: 740
  • Evalue 1.70e-210
conjugal transfer protein TrbI similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 425.0
  • Bit_score: 649
  • Evalue 6.20e-184

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Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGAGCACGCCCGCGATGCCACAATCTCCACCGGCCTGGACGAGTAAGGTCGATCCGGATACCTTGAGTCTGCGCGCGCCGCCGCGTCCGGTCACGCGGCTCAACCGGCGCCTGCTGGCCGTGCTCGCGGGAACACTGGGCGCGATCATCCTGGGGGCCACGCTATGGTCCTTGCAACCGCACAAGCGCGAACGCAACCCAGCCACCGAGCTGTACAACGTGGATCGCGTCTCACGGGCCGATAGCCTCGACCAATTGCCCAAGGACTATACCAAAGTGGTGCCAATGGTTAAGCCTGAGGTGCCGGTGTTGGGTGAGCCGTTGCCCGGTGACCTGGGGCCGGCCATCGTGCATGCGCAGAACCACGGGAACACGGGCGCGTACACCCCCGCGCAACCCGGTCGCATCGCACAGCCGGGCGATGCCGAGGATGCGGCGCGTTCGTCGGTGTTCTTCCGCAGCAGTAGTGCAACAAAGGCGGCACCGGCAACCACCGTAGCCGCAATCCAGCCCGAGCAGGCATCGGGCAATCAAGCCTTCAATCCGATGGCTTCGATATTGGCACAACTAACCGATCCGATGGCTGCGCAGAATCGGCAGGAGCAGAAGCAGGCGTTTGTCGCCAATGGCGTCGATACGACCACCCGCAATCCTGCCCGCCTGCAACTACCAGCCTCGCCCTACCAAGTGATGGCGGGCACCATCATTCCGGCGGCGCTGGTGACGGGCATCAACTCCGACCTGCCGGGGCAGGTCATCGCCAATGTCACCGAGGCGGTCTACGACACGGCCACCGGTCGCTTTCTGCTGATTCCGCAGGGCTCGCGGCTGATCGGCCGCTACGACAGTCAGGTTTCATTCGGTCAGCGACGGGTACTGCTGGTGTGGACGCGCTTGATCCTGCCTGATACTTCGTCGATTTCGCTCGACCGATTGCCTGGCATCGACCCGGCAGGCTATGCCGGGCTGGAGGATGGCGTCGATTGGCATTGGGATCGCATCCTTGCCGGTGCGGCGTTGTCCACGCTGCTCGGCGTCGGTGCGGAGCTGGCAGCACCCAACAACAACGGCGGCACCGGTAGCGTCACCGTCGCCGTTCGCCAGAGCGCGCAGGACACCGTGAACCAGGTCGGCCAGGAGATCACCAAACGCAATGCAAGCATCCAGCCGACGCTCACCATCCGGCCCGGTTTCCCGGTGCGGGTCATGGTGAACAAGGATCTGATCCTGCGGCCGTACCAGCCGCTGTTCTTCCAGAGG
PROTEIN sequence
Length: 420
MSTPAMPQSPPAWTSKVDPDTLSLRAPPRPVTRLNRRLLAVLAGTLGAIILGATLWSLQPHKRERNPATELYNVDRVSRADSLDQLPKDYTKVVPMVKPEVPVLGEPLPGDLGPAIVHAQNHGNTGAYTPAQPGRIAQPGDAEDAARSSVFFRSSSATKAAPATTVAAIQPEQASGNQAFNPMASILAQLTDPMAAQNRQEQKQAFVANGVDTTTRNPARLQLPASPYQVMAGTIIPAALVTGINSDLPGQVIANVTEAVYDTATGRFLLIPQGSRLIGRYDSQVSFGQRRVLLVWTRLILPDTSSISLDRLPGIDPAGYAGLEDGVDWHWDRILAGAALSTLLGVGAELAAPNNNGGTGSVTVAVRQSAQDTVNQVGQEITKRNASIQPTLTIRPGFPVRVMVNKDLILRPYQPLFFQR