ggKbase home page

SCNpilot_BF_INOC_scaffold_179_25

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 21257..21544

Top 3 Functional Annotations

Value Algorithm Source
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 id=12496708 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 96.0
  • Bit_score: 194
  • Evalue 5.70e-47
rpsR; 30S ribosomal protein S18 similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 95.0
  • Bit_score: 189
  • Evalue 5.20e-46
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 95.0
  • Bit_score: 189
  • Evalue 2.00e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGGCTCGTCCCATGGGTGGTAAATCCGGCGGCAAGTTCGCCAACAAGCGCCGCGACAGCGGCAACCGCGGTCTCTTCAAGCGTCGCAAGTTTTGCCGTTTCACCGCCGAGAAGGTCGTCGAGGTGGATTACAAGGACGTCGACGTGCTGAAGGAATTCATCAGCGAGAACGGCCGCATCATCCCTGCGCGCATCACCGGCACGAAGGCGCACTATCAGCGCCAGCTGTCCACCGCGATCAAGCGTGCGCGTTTCCTGGCGCTGATGCCGTACACCGACCTGCATTGA
PROTEIN sequence
Length: 96
MARPMGGKSGGKFANKRRDSGNRGLFKRRKFCRFTAEKVVEVDYKDVDVLKEFISENGRIIPARITGTKAHYQRQLSTAIKRARFLALMPYTDLH*