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SCNpilot_BF_INOC_scaffold_185_94

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(85286..85531)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq; K03666 host factor-I protein id=12497607 bin=THIO_MID species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 82.0
  • Bit_score: 160
  • Evalue 1.00e-36
RNA-binding protein Hfq; K03666 host factor-I protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 81.0
  • Bit_score: 155
  • Evalue 4.60e-35
RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 79.0
  • Bit_score: 150
  • Evalue 2.30e-34

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGGCGAGCAAAGAATACAACCACCTGCAAGATGTTTTTCTCAATACCCTGCGCAAGGAGCGCATCCCGGTATCGGTCTTCCTGGTCAACGGCATCAAGCTGATGGGCCGGATCGAGTCGTTCGACCAGTTCGTGGTGCTGCTGAAGGGTCAGGATCAGGCCGCGCAGATGATTTTCAAGCACGCAATCTCGACCATCTCGCCCTCGCGCGAAGTGGTCCTGCCGCCGCGCGACGCAGAGGCCTGA
PROTEIN sequence
Length: 82
MASKEYNHLQDVFLNTLRKERIPVSVFLVNGIKLMGRIESFDQFVVLLKGQDQAAQMIFKHAISTISPSREVVLPPRDAEA*