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SCNpilot_BF_INOC_scaffold_185_108

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 97359..98069

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor; K02405 RNA polymerase sigma factor for flagellar operon FliA id=12497621 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 237.0
  • Bit_score: 465
  • Evalue 3.30e-128
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 94.9
  • Coverage: 236.0
  • Bit_score: 445
  • Evalue 7.60e-123
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 236.0
  • Bit_score: 445
  • Evalue 3.80e-122

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGGCTGGAAAAAAATCGTCGCAAGACGAGCAAATCACCAAATACGCGCCACTGGTCAAACGCATCGCCTATCACATGATGGCGCGCCTGCCGGCCAGTGTCGAAGTCGATGATCTGATCCAGGTCGGTCTCATTGGTCTGATGGACGCGGTCGCACGGTTCGACGGCAGCCAGGGTGCGCAATTCGAGTCTTATGCCACGCAGCGCATCCGCGGCGCGATGCTCGATGAACTGCGCGAGGCCGACTGGCTGCCCCGTCACGTGCGCCAGAAATCCCGACAGATCGAAACGGCCATCCACAAGCTCGAACAGCGCAACGGGCGCGCGCCGAGCGAGCAGGAAATCTCCGCCGAGCTCGGTCTGGCGCTCGACCAGTACCAATCCATGCTGGGCGACGTGAAATGTTCGCAGTTGCTGTATTACGAGGATTTCTCGGATGAGGACAGCGCGAGCTTTCTCGAACGCTACCTGGTCGACGGCAGCAATGATCCGCTTGCGGTACTGGAGGACGAGGGATTCCGCGACAGCCTGATCGCAGCGATTCATCATCTGCCGGAACGCGAACGCAGCATGATGGGCATGTACTACGAACAGGACATGAACCTGAAGGAAATCGGTGCCGTGCTCGGGGTGTCCGAGTCGCGCGTCTGCCAACTGCACTCGCAGGCGGTGGCCCGCCTGCGCGCGCAGCTCAAGATATGGAAGGACTGA
PROTEIN sequence
Length: 237
MAGKKSSQDEQITKYAPLVKRIAYHMMARLPASVEVDDLIQVGLIGLMDAVARFDGSQGAQFESYATQRIRGAMLDELREADWLPRHVRQKSRQIETAIHKLEQRNGRAPSEQEISAELGLALDQYQSMLGDVKCSQLLYYEDFSDEDSASFLERYLVDGSNDPLAVLEDEGFRDSLIAAIHHLPERERSMMGMYYEQDMNLKEIGAVLGVSESRVCQLHSQAVARLRAQLKIWKD*