ggKbase home page

SCNpilot_BF_INOC_scaffold_19174_2

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 940..1668

Top 3 Functional Annotations

Value Algorithm Source
integrase family protein id=12497432 bin=THIO_MID species=Methylosarcina fibrata genus=Methylosarcina taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 243.0
  • Bit_score: 456
  • Evalue 1.60e-125
Tyrosine recombinase XerC {ECO:0000313|EMBL:GAO32690.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus am similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 236.0
  • Bit_score: 360
  • Evalue 2.10e-96
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 218.0
  • Bit_score: 328
  • Evalue 1.80e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ferriphaselus amnicola → Ferriphaselus → Gallionellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGGCCGCAAAGAAGGCGGAGGGGGTGGCAAATTCCTCTGTCAATCGTGTCCTTGAGGTGGTACGGGCCATCCTCCGCAAAGCAGCCAATGAGTGGGAATGGCTCGACCGGGTGCCGTATTTTCGTATGTTGCCCGAACCGAAACGCCGTATCCACTGGCTGTCGAAGGAAGAGGCCTCCCGGCTCTTGGCCGAACTGCCCGAGCATTTGCGTGCCATGGTGCGGTTCAGCCTCGAAACGGGCTTGAGAAAGTCCAACGTAACCGGCTTGTTGTGGTCGCAGGTGGACTTGGAACGGCGCTGTGCATGGGTACATGCTGACCAAGCGAAAGCGCGCAAGGCGATTGACGTGCCGCTTTCAAATGCTGCCGTGGTGGTTCTGCGGGGGCAGCTTGGGAAGCATGCTTCGCATGTTTTCAGCTACCGGGGGAACCCGATAGCGATGCCAAACAACAGCGCATGGGACAAGGCGTTGAAACGGGCTAGTATCGAGGATTTCCGCTGGCACGATCTGCGCCACACCTGGGCCAGTTGGCACGTTCAGGCGGGAACCCCGCTCCATGTTTTGCAGGAGCTGGGCGGCTGGGAATCGGTGGAAATGGTGCGGCGATACGCGCACCTGTCCAGTGAACACCTAGCCAACTACGTGGATAGGCTCTCTGGCTTCCATGTGGTCGAGGGCAACAGGGGCTACGATTTGGCTACGTTGCCGGAAATAAAAAGGGGCTAG
PROTEIN sequence
Length: 243
MAAKKAEGVANSSVNRVLEVVRAILRKAANEWEWLDRVPYFRMLPEPKRRIHWLSKEEASRLLAELPEHLRAMVRFSLETGLRKSNVTGLLWSQVDLERRCAWVHADQAKARKAIDVPLSNAAVVVLRGQLGKHASHVFSYRGNPIAMPNNSAWDKALKRASIEDFRWHDLRHTWASWHVQAGTPLHVLQELGGWESVEMVRRYAHLSSEHLANYVDRLSGFHVVEGNRGYDLATLPEIKRG*