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SCNpilot_BF_INOC_scaffold_263_103

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(100007..102301)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux transporter; K07003 id=12498087 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 765.0
  • Bit_score: 1471
  • Evalue 0.0
RND efflux transporter similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 766.0
  • Bit_score: 1171
  • Evalue 0.0
Exporter of the RND superfamily {ECO:0000313|EMBL:AAZ96585.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thioba similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 766.0
  • Bit_score: 1171
  • Evalue 0.0

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2295
ATGGAGACACTGAAAGCCTGGCTCGACGGGCGGCGCATGCTGCCGCCCTGGGTGGCGATGGGTATCGCGCTCGTCGTCCTCGCGGTCTCCATTCCCTATGTCCTGAAGCTGCATTTCAACAACGCGCCGGACATCTATTCGCCGTCCGATTCGCCCACGATCCAGCTGCGTGCGTCGCTGTTCAAGGAATTCCCCAACGACGAAACGATCGTCGTGCTGTTCGAGGGCGACGACCTCTACACGCCGGGCTTCCTGTCCGCACTCGACCGCGTCGCCCGGACCATGGAACGCCACCCTTCGGTCGACCGCGTGCTCACGCTCACCACGGTCGAGCACATCGAAGCCACCGACGACGGCTTCGCCGTCGCGCCGCTGGTCGACGCCCGCAAACTCGCCTCGCGCAGTCCCGCGCAATGGAAGGCCCGCGTACTCGGCGACCCCTTTGCGCCGGGCCTGCTCGCCTCGCGCGACGGGCGCGCCGTCGCGCTGGTCGTGCGGCCAAAATTCCTGAAAGAGAGCCTGGCACGGCGCGACGTGCTGATCGCGCTCGACGAGACCGTCGTCGCCGAGAAACTGGAGACCCACCGTACCGCCACCGCCGGCACGGTGGCGCAGACCGTCGAGGAGCTGCGCTCGCTGTGGCGCGACAGTGCCATTTTCATTCCCACCACTTTCCTGATCGGCATGGGCCTGTTGTGGTGGGTGGTCGGCCGCGTCCGGCCGGTTCTGATCGGCGGGCTGGCGATGAGCGTAACGGTCGCCGCCAGCGTCGGCGGGCTGGTCGCCACCGGCCAGCCCTATACGCCGGTGACCGCGATGATTCCGACGCTGATCGCGGCGTACACCACCGCCACGCTGCTGCATCTGTATGCCGCCATCCAGCGCGCGCGCATCGCACTGCTGCCGCGTCCGCAACGCATCGCCCGCGCACTCAAGGAAACCCTCGTGCCGGGACTGTTCAACGTGCTCACCACCGGTGCCGGCATGCTGAGCCTGTTGTGGGTGGATATCCCGCCGGTCCAGGCCTTCGGCCTGTCCGGTTCCATCGGCACGCTGATGGTATTCCTGGTCGTGTTCGTGCTGATGCCGCCCATCCTGCTCAAATGGGACGTGCCACGCTGGCCGCGCCGCCGTTCCGGGCTCGCCAAGGCACGTCGCATCGCGGCGGCCGTTTCGGTATTCAGCCTCCGCAATGCCCGCTGGGTACTGGGGGGCACCGCACTGCTCATCGCGGTCACGATTCCGCTGGCGATGCAGGTAAAGGTCGAGTCCAATCTGATCGAGTTCTTTTCGCCCAAACACAGCATCAGCCTCGGCACCGAACGGATCGAAAGCCGGCTAGCCGGCGTCACCGGACTGGAAATCGTGCTGACCGGCGCAGGCCGCGACGCACTCAAGGACCCCAGACGGCTGGCCGAAATCAAGGCACTGCAGCAATGGCTGGAGCAGCAGCCCGAAGTCGACCGCAGCCTTTCGGTCGCGGACATGATCGAGGAAATGAACCGCGCGCTGAGCGGCGAACCCGCCGGTGTCGATGCATTGCCGACCAGCCGCAAGCTGGTCGAACAGCTGATGCTGATCTACGACGGCAGCGACATGTTCGAACTGGTGAACCGCGAATTCCAGCGCGGCCGCATCGCCATGAGCCTGAACGTCCACGGTGTGAACGAGATCAGCGCGGTCATCGACCGCATCAAGGCGCATCTCGCCGCCCATCCGGTCGAAGGCGTGCAGATTCGCATGTCGGGCTACGGCCAGCTGTTTGCCGACCAGACCGATCGCATCGTCAACGGCCAGCTCAAGAGTTTCTCCTCGGCCTTCATCCAGATCCTGCTGCTGATGGCGCTGCTGTTCCGTTCGTTCCGCGGCGCGCTGATCTGCCTGATCCCGAATCTCGCGCCCCTGTTCTTCATCTTCGTGGTGATGGGCGTCACCGGCGTCGCGCTCGACGTCGCCACCGTACTGATCGCAGGGGTCATTCTCGGCATCACCGTGGACGACACCATCCATCTCTATCACGGCTATCTCCACCGTATCCGGCATGGTGTCAGTCCGGTGTTCGCGATCATACGCAGCGTGGAAAGCTCGGGGCGCGCGGTGATCGCGATCTCGGTCGTTCTGATCGCGCAATTCAGTCTGCTGGGCCTGTCTGATTTCAGGCCGACCGCGCACTTCGGCGCCCTGTGCGCGGTCGGCCTGTTCGCAGGTCAGGTGTTCGAGCTGCTGCTGATGCCGGCGCTGCTGGGCCTGCGCCTGCCCAGGCAGGACACGACGCTCAAGGCACGTTCAGCCTGA
PROTEIN sequence
Length: 765
METLKAWLDGRRMLPPWVAMGIALVVLAVSIPYVLKLHFNNAPDIYSPSDSPTIQLRASLFKEFPNDETIVVLFEGDDLYTPGFLSALDRVARTMERHPSVDRVLTLTTVEHIEATDDGFAVAPLVDARKLASRSPAQWKARVLGDPFAPGLLASRDGRAVALVVRPKFLKESLARRDVLIALDETVVAEKLETHRTATAGTVAQTVEELRSLWRDSAIFIPTTFLIGMGLLWWVVGRVRPVLIGGLAMSVTVAASVGGLVATGQPYTPVTAMIPTLIAAYTTATLLHLYAAIQRARIALLPRPQRIARALKETLVPGLFNVLTTGAGMLSLLWVDIPPVQAFGLSGSIGTLMVFLVVFVLMPPILLKWDVPRWPRRRSGLAKARRIAAAVSVFSLRNARWVLGGTALLIAVTIPLAMQVKVESNLIEFFSPKHSISLGTERIESRLAGVTGLEIVLTGAGRDALKDPRRLAEIKALQQWLEQQPEVDRSLSVADMIEEMNRALSGEPAGVDALPTSRKLVEQLMLIYDGSDMFELVNREFQRGRIAMSLNVHGVNEISAVIDRIKAHLAAHPVEGVQIRMSGYGQLFADQTDRIVNGQLKSFSSAFIQILLLMALLFRSFRGALICLIPNLAPLFFIFVVMGVTGVALDVATVLIAGVILGITVDDTIHLYHGYLHRIRHGVSPVFAIIRSVESSGRAVIAISVVLIAQFSLLGLSDFRPTAHFGALCAVGLFAGQVFELLLMPALLGLRLPRQDTTLKARSA*