ggKbase home page

SCNpilot_BF_INOC_scaffold_263_175

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 187284..187691

Top 3 Functional Annotations

Value Algorithm Source
biopolymer ExbD/TolR family transporter; K03559 biopolymer transport protein ExbD id=12498165 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 136.0
  • Bit_score: 263
  • Evalue 1.10e-67
biopolymer ExbD/TolR family transporter similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 135.0
  • Bit_score: 245
  • Evalue 8.70e-63
Biopolymer transport protein, ExbD/TolR family {ECO:0000313|EMBL:AAZ96311.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 135.0
  • Bit_score: 245
  • Evalue 4.30e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGGCCAGCGCGCACGAGGACGACCAGCCCTACGACGAGATCAACATCACGCCGATGCTCGACCTGGCGTATGTGCTGCTCGTCATCTTCATCATCATGACCACCGCCTCGGTGCAGGGCATCGAGGTCAATCTACCCAAGGCCAGCGACCAGCCGGCGCTGGCCAAGCCCAAGACGAAAGCGATCACGGTCAGCGACAGCGGCCAGGTCTATCTCGATACCTATCCCGTCACGCTCGACGAACTGCGCACGCAGCTCGCCGCCGCCCATGCCGCCGCGCCCGACCTGCCGGTCGTGGTCAAGGGTGACACGACGGTGCAGTACGGCAAGGTGATGGAGGTGCTCGATCTGCTCGGTCAGGTGGGCATCACGCAGATGGGGCTGGTGACCCAGCCGGCCGCGAAGTAG
PROTEIN sequence
Length: 136
MASAHEDDQPYDEINITPMLDLAYVLLVIFIIMTTASVQGIEVNLPKASDQPALAKPKTKAITVSDSGQVYLDTYPVTLDELRTQLAAAHAAAPDLPVVVKGDTTVQYGKVMEVLDLLGQVGITQMGLVTQPAAK*