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SCNpilot_BF_INOC_scaffold_299_29

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(29577..30530)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator id=12497460 bin=THIO_MID species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 318.0
  • Bit_score: 634
  • Evalue 5.50e-179
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 314.0
  • Bit_score: 396
  • Evalue 7.10e-108
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS19158.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 314.0
  • Bit_score: 396
  • Evalue 3.50e-107

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGATCGGCTCGACCTGCTCCGTATCTTTCTGCGCATCGCCGACAGCGGCAGCTTCACGCGTGCCGCCGAACAGCTCGGCCTGCCGCGCGCGACCGTCTCCGTCGCCGTGCGCCAGCTCGAATCGAATCTCGGCGTGCGTCTGCTGCACCGCACCACGCGGCGCGTCGGCCTGACCCCGGACGGTGAGGCCCTGCGCGTGCGTGCGGCCGTACTCGTCGACGACATGGAGGCACTGGAACGGCAGTTTCGTCCGGCTGGCGCCAACCTGACCGGGCGGCTGCGCGTGGATGCGCCCAGCCGTATCGCCCGGCGGTTCATCGTGCCGGCCTGGCCGGATTTCCTCGCGCGCCATCCCGGCATCGAGCTGGAGCTCGGCGCGGGCGATCGTCTCGTCGACCTCGCGCGCGAAGGCGTGGATTGCGCGCTGCGCGTGGGCGCCCTGGCGTCGAGCAGCCTGGTCGCCCGTCCGCTGGGCGCCTTCGAGATGATCAATTGCGCCAGTCCCAGCTATCTGGCGCAGCATGGCATGCCAAAGACAACGGACGGGCTGGACGGGCACTGGGCAATCGACTACGGACAGCCCTCCGGCGTGCGCTCGGCCAACTGGGAATGGCTTGAGGACGGGCAGCCGCGCAGCCGGCGAATGGCGAGCCGGTTGAGCGTGAATCACGTCGAAACCTACATTGCAGGCGCGCTGGCCGGGCTGGGATTGATCCAGGTGCCGCGGTTCGACGTGCGCGAACACCTGGCGGCAGGCGAGCTGATCGAAGTCATGCCGGCGGCCCGTCCGGCGCCGATGCCGGTCCATCTGGTCTATCCGCATCGCCAGCATCTGCCCGGGCGGGTCCATGCCTTTCTGGACTGGATTGCCGAACTGCTCGCGCCGCATCTGCGGGCCACCGGCCCGGCGGGCGCGCCGCCCTCGCGTCGTGCCCGCCGGAAAGCCGATTGA
PROTEIN sequence
Length: 318
MDRLDLLRIFLRIADSGSFTRAAEQLGLPRATVSVAVRQLESNLGVRLLHRTTRRVGLTPDGEALRVRAAVLVDDMEALERQFRPAGANLTGRLRVDAPSRIARRFIVPAWPDFLARHPGIELELGAGDRLVDLAREGVDCALRVGALASSSLVARPLGAFEMINCASPSYLAQHGMPKTTDGLDGHWAIDYGQPSGVRSANWEWLEDGQPRSRRMASRLSVNHVETYIAGALAGLGLIQVPRFDVREHLAAGELIEVMPAARPAPMPVHLVYPHRQHLPGRVHAFLDWIAELLAPHLRATGPAGAPPSRRARRKAD*