ggKbase home page

SCNpilot_BF_INOC_scaffold_43342_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 2..1606

Top 3 Functional Annotations

Value Algorithm Source
conjugative coupling factor TraD, TOL family id=12497086 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 535.0
  • Bit_score: 1023
  • Evalue 7.10e-296
conjugative coupling factor TraD, TOL family Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 513.0
  • Bit_score: 957
  • Evalue 8.80e-276
conjugative coupling factor TraD, TOL family similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 532.0
  • Bit_score: 689
  • Evalue 9.00e-196

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1605
CCTGCCTACGCTTGGGCAAGGCAATTCGAGTTCAGAAACGAGGGGAGGGGAGGACTACACGGATGGGTAGCCCGACAAACCCGGCGGGACGCATGGTGGAACCCTGTCGCCCCTCTTCCACCAGTCGGCGGCGATCCAGTGATTCACGGCCTGGAGCCGGAGGAATCCGAAGTCAGCATGGATCTGGTCGAGCGACCGGGCCACATGCTCGTGCTCGGGACAACCCGCGTCGGCAAATCCCGGCTCGCTGAGGTGCTCATTACACAGGACATCCGGCGCGGCGATGTGGTCATCGTCTTCGATCCCAAGGGAGATGCTGGCCTGATGACTCGGTGTTACATCGAAGCGGCCATGGCCGGCAGGGAGTTCTTCATGTTTCACTTGGGGTATCCCGACCAGTCGGCCCGGTACAACCCAATCGGCAACTTCGCCCGAACGACCGAGGTCAGCACGCGGATTGCCGGGCAGCTGCCCGGTGAGGGGCAATCTGCCGCGTTCAAGGAATTCGTGTGGCGCTTCGTCAACGTGATTGCAAGAGCACGAACCACGCTGGGCTACCGCCCGGACTACCGGATGATTTATGAGGATGCGGTCAATATCGACGCCCTTGCGCTCGAATACTTCAAATTCTGGCTTGACCGGGAGCGGCCGGGCTGGGACCGGGAGGTCGAAGCGATCGAGCTCGACAAGGCCCAGATCCAGCAAGTCATGAAGTCCGGCCGCACGATGGATGCGATGAAAACCATGCTGTTTGTCCGGGAGAACAACCTGCATGACCCGATAGCGGATGGTCTGGCCTCGATCCTCTCAAACGATCGAAGCTACTTCGAAAAGCTCGTTTCGAGCCTTTACCCACTGTTGGAGAAGCTCACCACCGGTAAAACAGCCGGCATTCTCTCGCCCCAGTACGACGATCCTGACGATCCCAGGCCGATTTTTGACTGGATGAGCGCGATCGAGCGCGGGGCAGTTGTGTATGTCGGACTGGACTCCCTGTCGGACTACGAGGTGGCCGGCACAGTCGGGAACGCCATGTTTGCGGACCTGACCTCGATTGCCGGCCAGATATACAAGTTCGATCAGGGATTCGGGCTTTCTTCGGCACCGCCCAAGCGGAAGCTCTCGATCCATGCCGATGAGTTCAACGAACTGATCGGGGACGAATTCATCCCGCTGCTGAACAAGGCTGGCGGCGCGGGGTTTCAGGTGACGGTCTACACCCAGACCTGGGCCGACGTCGAGGCCCGCATTGGGGACAAGGCCAAGGCATCCCAGATTGGCGGCAACCTGAACACCCTGGTCATGCTTCGCGTGAAAAACAAGGAGACGGCAGAAATCCTGACCAACCAGCTGCCCGAAGTGCAGCTGGTGACTTCGATCCAGGCCAGCGCTGTCACGGATAGCTCCGATGATCGCGAGGTTCTGTCCTTTACGACCCGCAACGAGGACAGGATCAGTACCCAGGAGGCTCCGATGCTGGCCCCAGCGGATCTGGTACAACTTCCCAAGGGTCAAGCTTTCGCGCTCATCGAGGGCGGCCAGCTTTACAAGATCCGGCTGCCTCTATTCGACCCGGACGAGGCCTTGCCCATTCCGGCATCGCTG
PROTEIN sequence
Length: 535
PAYAWARQFEFRNEGRGGLHGWVARQTRRDAWWNPVAPLPPVGGDPVIHGLEPEESEVSMDLVERPGHMLVLGTTRVGKSRLAEVLITQDIRRGDVVIVFDPKGDAGLMTRCYIEAAMAGREFFMFHLGYPDQSARYNPIGNFARTTEVSTRIAGQLPGEGQSAAFKEFVWRFVNVIARARTTLGYRPDYRMIYEDAVNIDALALEYFKFWLDRERPGWDREVEAIELDKAQIQQVMKSGRTMDAMKTMLFVRENNLHDPIADGLASILSNDRSYFEKLVSSLYPLLEKLTTGKTAGILSPQYDDPDDPRPIFDWMSAIERGAVVYVGLDSLSDYEVAGTVGNAMFADLTSIAGQIYKFDQGFGLSSAPPKRKLSIHADEFNELIGDEFIPLLNKAGGAGFQVTVYTQTWADVEARIGDKAKASQIGGNLNTLVMLRVKNKETAEILTNQLPEVQLVTSIQASAVTDSSDDREVLSFTTRNEDRISTQEAPMLAPADLVQLPKGQAFALIEGGQLYKIRLPLFDPDEALPIPASL