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SCNpilot_BF_INOC_scaffold_5420_5

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 3818..4024

Top 3 Functional Annotations

Value Algorithm Source
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) id=12495384 bin=THIO_HI species=unknown genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 142
  • Evalue 1.40e-31
cold-shock DNA-binding protein family protein similarity KEGG
DB: KEGG
  • Identity: 97.1
  • Coverage: 68.0
  • Bit_score: 140
  • Evalue 2.00e-31
Possible Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:AAZ96808.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 68.0
  • Bit_score: 140
  • Evalue 9.80e-31

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGGCAACAGGTACTGTCAAGTGGTTCAGCGACGCCAAGGGTTTCGGATTCATCACCCCAGATGACGGCGGCGAAGATGTGTTCGCACATTTTTCCGCCATCCAATCCAGCGGTTTCAAGACCCTGAAGGAAGGCCAGAAAGTCAGCTTCGAAGTCAGCCAAGGCCCCAAGGGCAAGCAGGCTTCCAACATCCAGCCGCAAGGTTGA
PROTEIN sequence
Length: 69
MATGTVKWFSDAKGFGFITPDDGGEDVFAHFSAIQSSGFKTLKEGQKVSFEVSQGPKGKQASNIQPQG*