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SCNpilot_BF_INOC_scaffold_592_183

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(173623..174057)

Top 3 Functional Annotations

Value Algorithm Source
signal transduction protein id=12498430 bin=THIO_MID species=Pandoraea sp. SD6-2 genus=Pandoraea taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 130.0
  • Bit_score: 277
  • Evalue 7.80e-72
Calcium-binding EF-hand {ECO:0000313|EMBL:EON13555.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2. similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 95.0
  • Bit_score: 67
  • Evalue 1.30e-08
Ca2+ sensor similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 115.0
  • Bit_score: 63
  • Evalue 5.00e-08

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Taxonomy

Pandoraea sp. SD6-2 → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
GTGCATGGGTTGCAAGGCTTGAGCCACGACGATATCGATGACTACATGAAACGCCTGATCTTGGTCTGCTGCCTGGGCTGCGTATTCGGCTATGGGCCGGCGGGGTACGCGCATGCCAGCGACACGCCCGACTGGGGGCAGATGCGCCGGGATATCGACGCGGGCGCTCACGGGCCCGACGATGCGGCCTTCGAGGCGCGCCGACGGCACATCCGCGAGCGCGCACGCGCGCATTTCGCGGCTGCCGACCGCGATGGCGACGGCAAGCTCAGCAGGGAAGAGGTTGCGCAACTGCGGCCCTTTCTCGCCCGGCATTTCGACCGTATCGATACCGACCACGACGGCCTGCTCAGCGAACGGGAGCTGGCCGATGCGTGGCGCCATATGCCGCCGCGGCGGCATGCGCATCCCGTGTACGAATCGCCGCTGCGCTGA
PROTEIN sequence
Length: 145
VHGLQGLSHDDIDDYMKRLILVCCLGCVFGYGPAGYAHASDTPDWGQMRRDIDAGAHGPDDAAFEARRRHIRERARAHFAAADRDGDGKLSREEVAQLRPFLARHFDRIDTDHDGLLSERELADAWRHMPPRRHAHPVYESPLR*