ggKbase home page

SCNpilot_BF_INOC_scaffold_592_40

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 40562..43972

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=12498290 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2254
  • Evalue 0.0
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=292415 species="Bacteria; Pr similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 999.99
  • Bit_score: 1971
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 999.99
  • Bit_score: 1971
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3411
ATGCTGTTCTCGCCCACCGCCCCTCCCTCCCGCCAGTCCGGCCTCGCCGGTGCCGCCGACGCACTGTGGCTGGCCGAACGCGCGCGCCATGGCGCGCCGCTGGCCGTGGTATGCGCCAGCGCCTGGGACGCGCAGCGGCTGGCCGAGGAGATTCGCTGGTTCGACGCCTGTCTGCGGATCTGCGTGTTTCCGGACTGGGAAACGCTGCCCTACGACAGCTTTTCGCCGCATCCCGATCTGATCTCGGAACGGCTGGCGACGCTGTATCCGATGTCGCGCGGCGAGTTCGACGTGCTGGTGGTGGCACTGACGACCGCGCTGGTACGGCTGGCGCCGCCCGCCTTTCTGGCCGCCCACACCTTCTTTCTCAAGCAGAAGGACCGTCTCGACGAGGCCGCCTTCCGCACGCAGATGACGCTGGGCGGCTATACCCACGTCAATCAGGTGTATACACCGGGCGAGTTTTCCATCCGCGGCGGTCTGATCGACCTTTTTCCCATGGGCAGCGCACTGCCCTACCGCATCGACCTCTTCGACGACGAGATCGAAACACTGCGCGCTTTCGACGTGGACAGCCAGCGCAGTCTCTATCCGGTCCCCGAGATTCGCCTGCTGCCGGCGCGCGAATTCCCCCTCGACGAAGCCGGCATCACGCGCTTCCGGCAGCATTTCCGCGAACGCTTCGAGGGGGACCCGTCCAAATCCAAGCTCTACAAAGACGTGAGCAACGGGCTTGCGCCCGCCGGTATCGAGTATTACCTGCCGCTCTTTTTCGAGACGACCGCGACGCTGTTCGACTATCTGCCCGCCTCGACCACCCTGGTGCTGCACGGCGCGCTGGACGAGGCCGGGCAGGCCTTCTGGACCGATGCGCAGAGCCGCCACCGGCTACTGTCCGGCGACCGTGACCGGCCACTGCTGTCGCCGGCCGAACTGTTCCTGCCGGTCGACGATTTCTTCTCGCGCGCCAAAGGCTGGCCGCAACTGCATCTGGCACAGGCCGGCGCAGGCCCGGCGCAACCGGTTCCGCCGATATCCGTAGACCGCCGCGAAGCGCACCCGGTCGCACGGCTGAAGGCTTTTGTCGAAGGCTTTGCCGGCCGCGTGCTGATCGTCGCACCCTCGGCCGGCCGCCGCGACACCCTGCACGAATACCTTGCCGAACACGATCTCGACGCGGCCCTCTGCGAGGGCTGGGCGGCCAACTGCCTCGACGCGCAGGCGCGGCTGCTGCTGACGCACGGGCCGCTGGCCGAGGGTTTCGTCGCCGCCGGCGCGGGGCTGGCCGTCGTCACCGAAACCGAGCTGTACGCGATTCCGCCGAAAACGCGGCGCGCCCGCGAGGCGCGCGCCACGCAGATCGACAACCTGCTGCGCGATCTCTCGGAACTGAAGCCGGGCGACCCGGTGGTGCACGCGCAATACGGGGTCGGCCAGTATCTCGGCCTCGTCAGCATGGACCTGGGCGACGGCGACACCGAGTTCCTCAAGCTGGAATACGCCAAGGGCGACACGCTCTACGTGCCGGTCGCCAACCTGCACCTGATCTCGCGCTACAGCGGCGCGGGCGAAGGCGAGGCGCCGCTGCACCGGCTGGGCACCGACCAGTGGGAAAAGGCGCGCCGGCGCGCCATGCAGGCGGCACGCGACACCGCCGCCGAGCTGCTGAATCTGTATGCGCTGCGCGCCGCGCGTGAAGGCCATGCCTTCGCATTCTCGCCGCACGACTACGAGGCCTTCGCCGAAGGCTTCGGCTTCGAGGAAACACCCGATCAGGCCGCCGCCATCGCCGCCGTCATGGCCGACATGCAGTCTGGCAAGCCGATGGACCGGCTGGTCTGCGGCGACGTCGGCTTCGGCAAGACCGAAGTCGCGCTGCGCGCCGCCTTCATGGCGGTGATGGGCGGCTATCAGGTCGCGGTGCTGGTGCCGACCACGCTGCTGGCCGAACAACATTTCAACAATTTCTCCGACCGCTTTTCGCAATGGCCGGTGAAGCTCGCCGAGCTGTCGCGCTTCCGTACCGCCAAGGAACAGGCCGCCGCGCTCGATGCACTGAAGGACGGCAAGCTCGACATCGTGATCGGCACCCACCGGCTGATCCAGAAGGACGTGAAATTCGCCCGTCTGGGCCTCGTCATCCTGGACGAGGAACACCGTTTCGGCGTGCGCCAGAAAGAACAGCTGAAAGCCCTGCGTGCCGAGGTGGACGTGCTGACGCTGACCGCGACGCCGATTCCGCGGACGCTGGCGATGTCGCTCGAAGGCATTCGAGACTTCTCGGTGATCGCCACCGCACCGCAGAAGCGGCTGGCGGTGAAAACCTTCGTACAGCCCTTCTCAGGCGGGCTGATCCGCGAAGCCGTGCTGCGCGAGCTGAAACGCGGCGGACAGGTCTATTTCCTGCACAACGAGGTCAGCACCATCGAATCGATGCGTGAGCGGCTGGAAAAACTGCTGCCCGAGGCGCGCATCCGGGTCGGCCATGGCCAGATGGGCGAACGCGAGCTGGAGCAGGTGATGCGCGATTTCTACCAGCAGCGCTACGACATCCTGCTGTGCACCACCATCATCGAAACCGGCATCGACATCCCGACCGCGAACACCATCCTCATCAACCGCGCCGACAAATTCGGGCTCGCACAGCTGCACCAGTTGCGCGGCCGCGTCGGCCGTTCGCACCACCAGGCCTTCGCCTATCTGCTGGTGGACGAGGACAGAAACCTTACACCCCAAGCGAAGAAACGCCTGGAAGCCATTCAATTAATGGAAGAATTGGGATCCGGGTTCCATCTCGCCATGCACGATCTGGAAATCCGCGGCGCGGGCGAAGTGCTGGGCGACAAGCAAAGCGGCGAAATCCTGGAGGTCGGTTTCTCGCTCTACAACGAGATGCTCGCCGGCGCCGTCGCCAGCCTCAAGGCCGGCAGGGAACCGGACATGAACCAGCCGCTCGACGTGGTCTCCGAAATCAATCTTCATCTGCCGGCGCTGCTGCCGGACGACTATTGCCCGGACGTGCACGAGCGGCTGGTGCTCTACAAGCGGCTGGCGACCTGCGCCGCGCCGGACGATCTGACGGCGATGCAGGAGGAGCTGGTCGACCGTTTCGGTGCGCTGCCCGATCCGGCCCGCGCGCTGCTCGCGGTGCACCGCCTGCGCATGGCCACGCGCGCCTACGGCATCGTCAAGCTCGACGCGTCCGGCGAGGGCATGAGCGTGCAGTTCGTGCCCAAGCCGCCCGTCGATCCGGGTAGAATTCTGCACTTGATCCAGGGCAAGGCCGGCTACCGCCTTGCCGGCCCGGACCGGTTGCGGCTGACGACGCCGCTGCCCGATCTGGCCCGGCGGCTGGGCGCCGTCAACGCCTTTCTCGCCGCCCTGGGCGATCCCCTTCCACCCGCTGCCTGA
PROTEIN sequence
Length: 1137
MLFSPTAPPSRQSGLAGAADALWLAERARHGAPLAVVCASAWDAQRLAEEIRWFDACLRICVFPDWETLPYDSFSPHPDLISERLATLYPMSRGEFDVLVVALTTALVRLAPPAFLAAHTFFLKQKDRLDEAAFRTQMTLGGYTHVNQVYTPGEFSIRGGLIDLFPMGSALPYRIDLFDDEIETLRAFDVDSQRSLYPVPEIRLLPAREFPLDEAGITRFRQHFRERFEGDPSKSKLYKDVSNGLAPAGIEYYLPLFFETTATLFDYLPASTTLVLHGALDEAGQAFWTDAQSRHRLLSGDRDRPLLSPAELFLPVDDFFSRAKGWPQLHLAQAGAGPAQPVPPISVDRREAHPVARLKAFVEGFAGRVLIVAPSAGRRDTLHEYLAEHDLDAALCEGWAANCLDAQARLLLTHGPLAEGFVAAGAGLAVVTETELYAIPPKTRRAREARATQIDNLLRDLSELKPGDPVVHAQYGVGQYLGLVSMDLGDGDTEFLKLEYAKGDTLYVPVANLHLISRYSGAGEGEAPLHRLGTDQWEKARRRAMQAARDTAAELLNLYALRAAREGHAFAFSPHDYEAFAEGFGFEETPDQAAAIAAVMADMQSGKPMDRLVCGDVGFGKTEVALRAAFMAVMGGYQVAVLVPTTLLAEQHFNNFSDRFSQWPVKLAELSRFRTAKEQAAALDALKDGKLDIVIGTHRLIQKDVKFARLGLVILDEEHRFGVRQKEQLKALRAEVDVLTLTATPIPRTLAMSLEGIRDFSVIATAPQKRLAVKTFVQPFSGGLIREAVLRELKRGGQVYFLHNEVSTIESMRERLEKLLPEARIRVGHGQMGERELEQVMRDFYQQRYDILLCTTIIETGIDIPTANTILINRADKFGLAQLHQLRGRVGRSHHQAFAYLLVDEDRNLTPQAKKRLEAIQLMEELGSGFHLAMHDLEIRGAGEVLGDKQSGEILEVGFSLYNEMLAGAVASLKAGREPDMNQPLDVVSEINLHLPALLPDDYCPDVHERLVLYKRLATCAAPDDLTAMQEELVDRFGALPDPARALLAVHRLRMATRAYGIVKLDASGEGMSVQFVPKPPVDPGRILHLIQGKAGYRLAGPDRLRLTTPLPDLARRLGAVNAFLAALGDPLPPAA*