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SCNpilot_BF_INOC_scaffold_60545_1

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 2..301

Top 3 Functional Annotations

Value Algorithm Source
type II and III secretion system protein id=12498044 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 89.0
  • Bit_score: 140
  • Evalue 7.90e-31
General secretion pathway protein GspD {ECO:0000313|EMBL:GAO34641.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Su similarity UNIPROT
DB: UniProtKB
  • Identity: 48.2
  • Coverage: 110.0
  • Bit_score: 103
  • Evalue 1.90e-19
type II and III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 81.0
  • Bit_score: 102
  • Evalue 5.10e-20

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Taxonomy

Sulfuricella sp. T08 → Sulfuricella → Sulfuricellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
GTCGACAAGGTTCCGGTGCTGGGCGACATCCCGCTGTTCGGCCATCTGTTCAAGTCGGAAAAGCGCAAGCGCATGAAAACCAACCTGATGGTGTTCCTGCGGCCACACGTCCTGCGCGACACGGTGAGCGCCGATGCGATGACCGGCGAACGCTACGACTTCATCCGCCAGAAGCAGGCCGAGTTCCGTATGCAGCCGCATTTCATTCTACCCGACATGCAGATGAGCCCATTGCCCGAGCTGGCCAATCCGCCGCTGCCCGTGCCCGCCGACCAGCCGCAATCGCCGGCACCCCGATGA
PROTEIN sequence
Length: 100
VDKVPVLGDIPLFGHLFKSEKRKRMKTNLMVFLRPHVLRDTVSADAMTGERYDFIRQKQAEFRMQPHFILPDMQMSPLPELANPPLPVPADQPQSPAPR*