ggKbase home page

SCNpilot_BF_INOC_scaffold_681_18

Organism: SCNpilot_BF_INOC_Thiobacillus_strain2_63_25

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 7323..7853

Top 3 Functional Annotations

Value Algorithm Source
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=12498458 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 343
  • Evalue 1.40e-91
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 176.0
  • Bit_score: 309
  • Evalue 6.40e-82
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 176.0
  • Bit_score: 309
  • Evalue 3.20e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGTCTCGTGTAGCTAAAAACCCGATTGCTGTGCCCGCAGGTGTCGAAGTGACACTGGGCGCTGATATTTCGGTCAAGGGACCGCTTGGCACCATCAGGCAGGCTGCCTCGTCCGATGTGACCGTAGCGCTGAACGATGGCGTGCTGACCTTCGCGCCTGTTGGCGGCGGTGTACAGGCAAATGCCATGGCGGGTACGATGCGTGCGCTGCTGAACAACATGGTGCAGGGCGTTTCGAAAGGTTTCGAAAAGCGCCTGACGCTGGTGGGCGTGGGGTATCGTGCGCAAGCCCAGGGTGACTCGCTGAACCTGTCGCTGGGTTTCTCGCATCCTGTCGTGCACAAGATGCCGGCAGGCATCAAGGTCGAAACGCCTTCGCAGACCGAAATCGTGATCAAGGGCATCGATCGCCAGGTCGTTGGCCAGGTGGCTGCTGACGTGCGCGCCTATCGTCCGCCGGAACCCTACAAGGGCAAGGGTGTTCGTTACAGCGACGAAGTGGTCATCAAGAAAGAGACCAAGAAAAAGTAA
PROTEIN sequence
Length: 177
MSRVAKNPIAVPAGVEVTLGADISVKGPLGTIRQAASSDVTVALNDGVLTFAPVGGGVQANAMAGTMRALLNNMVQGVSKGFEKRLTLVGVGYRAQAQGDSLNLSLGFSHPVVHKMPAGIKVETPSQTEIVIKGIDRQVVGQVAADVRAYRPPEPYKGKGVRYSDEVVIKKETKKK*