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SCNpilot_BF_INOC_scaffold_151_151

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 167890..168423

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Fusobacterium nucleatum subsp. animalis 4_8 RepID=R9R933_FUSNU similarity UNIREF
DB: UNIREF100
  • Identity: 28.0
  • Coverage: 186.0
  • Bit_score: 69
  • Evalue 4.00e-09
sigma-70, region 4 family protein similarity KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 172.0
  • Bit_score: 97
  • Evalue 3.80e-18
Sigma-70, region 4 family protein {ECO:0000313|EMBL:AIY84266.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. similarity UNIPROT
DB: UniProtKB
  • Identity: 30.8
  • Coverage: 172.0
  • Bit_score: 97
  • Evalue 1.90e-17

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 534
ATGATTAAGGAATGCATTAATGACTACAGAAATGGTGAGGACAATAATTTAGAAAAAATAATTTCAATGTTTATGCCACTTATAAAAAAGTACAATCGTTATTATTATGATGAAGATATAAGCTCAGAGTTTGTTATTGTACTAATAGAGTTAGTAATGAAAATTGACTTAAATAAATTTGATTCAGAGGGTGCTATTGTAAACTACATTAGTACGACAATAAAAAATAAATTTATAGATTTAATAAGAAATAAAAGAAAACATTCTGAATTGGTTTTAAGTAATGATGAATTTGAAGTTAGTAATTCTATAGATGACGTTGATGTTTTAGTAAATAAGTTGGCTTTAGAAAATTTACAACAATTACTAAGTAAAAAAGAAAGGATTATAATTGTTGAATTATTTGTAAATCAAAAGAAAGGTATTGAAATTGCGAATGAATTGGGTCTAAGTAAGCAAAATATACATAATATCAAAAAAAGAGCGTTAAATAAAATAAAGAAACAGATTGAAGAGGAGAACATATGGAATTAG
PROTEIN sequence
Length: 178
MIKECINDYRNGEDNNLEKIISMFMPLIKKYNRYYYDEDISSEFVIVLIELVMKIDLNKFDSEGAIVNYISTTIKNKFIDLIRNKRKHSELVLSNDEFEVSNSIDDVDVLVNKLALENLQQLLSKKERIIIVELFVNQKKGIEIANELGLSKQNIHNIKKRALNKIKKQIEEENIWN*