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SCNpilot_BF_INOC_scaffold_524_14

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: comp(18119..18322)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0003118058 similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 63.0
  • Bit_score: 122
  • Evalue 1.50e-25
Cold shock protein {ECO:0000313|EMBL:CDL92771.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 63.0
  • Bit_score: 122
  • Evalue 2.10e-25
cspC2; cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 63.0
  • Bit_score: 118
  • Evalue 1.00e-24

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Taxonomy

Clostridium tyrobutyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 204
ATGATGAATGGTACAGTAAAATGGTTTAACTCAGAAAAAGGCTATGGCTTTATCACTGGTGAAGACGGCAAAGACGTTTTCGCTCACTACTCACAAATCAATGTTGATGGTTTCAAAACTCTTGAAGAAGGTCAAGCAGTTACTTATGAAGTAGCTCAAGGCCAAAAAGGTCCTCAAGCTGAAAACATCACACCAGTTAGATAA
PROTEIN sequence
Length: 68
MMNGTVKWFNSEKGYGFITGEDGKDVFAHYSQINVDGFKTLEEGQAVTYEVAQGQKGPQAENITPVR*