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SCNpilot_BF_INOC_scaffold_67_27

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: comp(25480..25701)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Clostridium ultunense Esp RepID=M1Z5R5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 71.0
  • Bit_score: 113
  • Evalue 1.30e-22
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 71.0
  • Bit_score: 111
  • Evalue 5.20e-22
RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 72.0
  • Bit_score: 108
  • Evalue 6.80e-22

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Taxonomy

Clostridium ultunense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 222
GTGAAAAGTGCGCTCAATCTTCAAGACCTGTTTTTGAATCAATGCCGTAAAGACCAAACACCGATTACTATTTTCTTAATCAGTGGTTACCAAATTAGAGGTCTCGTAAAAGGCTTTGACAGCTACACCATCGTTCTCGATAGTGAAGGCAAACAACAAATGATTTACAAGCATGCCATTTCGACTATTATCCCGTCGAAAACCGTTAATTTCCAAGGTTAG
PROTEIN sequence
Length: 74
VKSALNLQDLFLNQCRKDQTPITIFLISGYQIRGLVKGFDSYTIVLDSEGKQQMIYKHAISTIIPSKTVNFQG*