ggKbase home page

SCNpilot_BF_INOC_scaffold_67_114

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: comp(110330..111385)

Top 3 Functional Annotations

Value Algorithm Source
Putative Type II secretion system protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PX16_CLOSD similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 344.0
  • Bit_score: 280
  • Evalue 2.90e-72
putative Type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 344.0
  • Bit_score: 280
  • Evalue 8.20e-73
Putative Type II secretion system protein {ECO:0000313|EMBL:CBH20981.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 344.0
  • Bit_score: 280
  • Evalue 4.10e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] sticklandii → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1056
ATGGATCAATCAAACGGTGTTAAAAAATTGAGTACATCAGAATTGAGTATATTTTGTTATCAATTTTCTGTGGTTTTAAAAGCAGGCTTGCCTTACATAGAGGCATTACATCTTCTATCAGGAGATGTTTTCGAAGGACGTATGAAGCATTTGGCACATCAGATTTATCTAGACGCAGAGCAGGGAATGCCATTAAGCGAAGCTATCGCTGTGCGTGGTATTTTTCCAGAATATATGGTGGCGATGTTGAGAATCGCTGAAAATACAGGTCGATTACCAGAAGTGTTTGAACAGCTTTCAAAGCATTATGAGCAAAATGAGATCGTCAAACAGAAGGTGAAAAATGCACTTGTGTATCCTGTCGTCTTAATTGCGCTTATGGCAGCTGTAATTCTACTTTTAGTTCTAAAAGTTTTGCCAATCTTCCATGAAATTTTACTCTCAGTCGGGGGTGAAATTCCAACAGCTACTCAATTTGTTTTGGATTTTAGTGAGGGCTTACAAAATGGTTTGATTATTATTATTGGTCTTGTAGCGCTTGTTGCTATTTATTTGGTGCTTTTATTTAAAACGCGCCTATTACTTGCTCAAAGAGATCGCTTGTTAATAAAAGCACCAATTGCGTCCAAGCTTTATAAGCAAGCTATCGTTGTTAAGTTTTCATCGGCTCTTTCGATATTGACTAAGAGTGGTATGCCAATCCAGTCAAGCTTGGATATGATTTTACCTCTGATGGAAAATGCATATGTTGAAGAAAAATTAAAAATGGCAATCAGTGCTATAGAAGCTGGAAAGCCATTGGCCACCGCATTAGAAGAGACTGAGCTTTTTCCTAAGTTGTTTATAAGAATGATAACACTTGGGGATAAAACAGGTGAACTGGATCAAATGCTGGATAAAATCTCTAGCATTTACGATGCAGAATTGAGCAGAGGCTTACATCGCATGACGGTTTCTATCGAGCCGACCTTGGTGATTATTTTATCTCTAGTTGTTGGCGCAATTCTTTTGCTCGTTATGTTACCATTGATTAACATCATGTCCTCTATTGGTTAG
PROTEIN sequence
Length: 352
MDQSNGVKKLSTSELSIFCYQFSVVLKAGLPYIEALHLLSGDVFEGRMKHLAHQIYLDAEQGMPLSEAIAVRGIFPEYMVAMLRIAENTGRLPEVFEQLSKHYEQNEIVKQKVKNALVYPVVLIALMAAVILLLVLKVLPIFHEILLSVGGEIPTATQFVLDFSEGLQNGLIIIIGLVALVAIYLVLLFKTRLLLAQRDRLLIKAPIASKLYKQAIVVKFSSALSILTKSGMPIQSSLDMILPLMENAYVEEKLKMAISAIEAGKPLATALEETELFPKLFIRMITLGDKTGELDQMLDKISSIYDAELSRGLHRMTVSIEPTLVIILSLVVGAILLLVMLPLINIMSSIG*