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SCNpilot_BF_INOC_scaffold_115

Search features with annotation key words

Displaying items 91-120 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_115_91
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

101161..104106
DNA (2946bp) protein (982aa)
Signal transduction histidine kinase, LytS n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9S9_FLUTR
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:AEA43075.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola
SCNpilot_BF_INOC_scaffold_115_92
unknown

Not on your lists

104155..104400
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_115_93
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(104456..106471)
DNA (2016bp) protein (672aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
Urocanate hydratase n=1 Tax=Myroides odoratimimus CCUG 3837 RepID=K1HAG4_9FLAO
urocanate hydratase
SCNpilot_BF_INOC_scaffold_115_94
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(106514..108001)
DNA (1488bp) protein (496aa)
Putative uncharacterized protein id=1825812 bin=GWE2_Bacteroidetes_42_42 species=unknown genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
SCNpilot_BF_INOC_scaffold_115_95
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(108046..109326)
DNA (1281bp) protein (427aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II54_FLUTR
SCNpilot_BF_INOC_scaffold_115_96
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(109323..110426)
DNA (1104bp) protein (368aa)
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II55_FLUTR
SCNpilot_BF_INOC_scaffold_115_97
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(110512..111051)
DNA (540bp) protein (180aa)
50S ribosomal protein L17 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II56_FLUTR
50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.
SCNpilot_BF_INOC_scaffold_115_98
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(111073..112065)
DNA (993bp) protein (331aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II57_FLUTR
SCNpilot_BF_INOC_scaffold_115_99
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(112082..112690)
DNA (609bp) protein (203aa)
30S ribosomal protein S4 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II58_FLUTR
30S ribosomal protein S4P; K02986 small subunit ribosomal protein S4 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
30S ribosomal protein S4
SCNpilot_BF_INOC_scaffold_115_100
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists


comp(112745..113131)
DNA (387bp) protein (129aa)
30S ribosomal protein S11 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II59_FLUTR
30S ribosomal protein S11P; K02948 small subunit ribosomal protein S11 Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
30S ribosomal protein S11
SCNpilot_BF_INOC_scaffold_115_101
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(113148..113522)
DNA (375bp) protein (125aa)
30S ribosomal protein S13 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II60_FLUTR
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis
SCNpilot_BF_INOC_scaffold_115_102
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(113536..113652)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II61_FLUTR
50S ribosomal protein L36P; K02919 large subunit ribosomal protein L36 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
50S ribosomal protein L36
SCNpilot_BF_INOC_scaffold_115_103
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(113661..113879)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II62_FLUTR
translation initiation factor 1 (bIF-1); K02518 translation initiation factor IF-1 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
translation initiation factor 1 (bIF-1)
SCNpilot_BF_INOC_scaffold_115_104
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(113883..115238)
DNA (1356bp) protein (452aa)
Protein translocase subunit SecY n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II63_FLUTR
protein translocase subunit secY/sec61 alpha; K03076 preprotein translocase subunit SecY Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
protein translocase subunit secY/sec61 alpha
SCNpilot_BF_INOC_scaffold_115_105
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(115264..115710)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II64_FLUTR
50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.
SCNpilot_BF_INOC_scaffold_115_106
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(115729..115905)
DNA (177bp) protein (59aa)
50S ribosomal protein L30 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIQ8_FLUTR
50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
50S ribosomal protein L30
SCNpilot_BF_INOC_scaffold_115_107
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(115917..116432)
DNA (516bp) protein (172aa)
30S ribosomal protein S5 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIQ9_FLUTR
30S ribosomal protein S5P; K02988 small subunit ribosomal protein S5 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
30S ribosomal protein S5
SCNpilot_BF_INOC_scaffold_115_108
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(116442..116795)
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIR0_FLUTR
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="F
SCNpilot_BF_INOC_scaffold_115_109
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(116808..117365)
DNA (558bp) protein (186aa)
50S ribosomal protein L6 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIR1_FLUTR
50S ribosomal protein L6
50S ribosomal protein L6P; K02933 large subunit ribosomal protein L6 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_BF_INOC_scaffold_115_110
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(117387..117785)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIR2_FLUTR
30S ribosomal protein S8P; K02994 small subunit ribosomal protein S8 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
30S ribosomal protein S8
SCNpilot_BF_INOC_scaffold_115_111
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists


comp(117801..118115)
DNA (315bp) protein (105aa)
30S ribosomal protein S14 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIR3_FLUTR
30S ribosomal protein S14P; K02954 small subunit ribosomal protein S14 Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
30S ribosomal protein S14
SCNpilot_BF_INOC_scaffold_115_112
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(118123..118674)
DNA (552bp) protein (184aa)
50S ribosomal protein L5 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIR4_FLUTR
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;
SCNpilot_BF_INOC_scaffold_115_113
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(118674..118991)
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIR5_FLUTR
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis
SCNpilot_BF_INOC_scaffold_115_114
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(119004..119372)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIR6_FLUTR
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.
SCNpilot_BF_INOC_scaffold_115_115
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(119382..119639)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIR7_FLUTR
30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.
SCNpilot_BF_INOC_scaffold_115_116
Ancylostoma ceylanicum, Ancylostoma, Rhabditida, Chromadorea, Nematoda, Metazoa

Not on your lists


comp(119642..119836)
DNA (195bp) protein (65aa)
Ribosomal protein L29 {ECO:0000313|EMBL:EPB65713.1}; TaxID=53326 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Ancylostomatoidea; Ancylostomatidae; Ancylostom
50S ribosomal protein L29
50S ribosomal protein L29 id=4226195 bin=GWA2_Flavobacterium_35_26 species=unknown genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Flavobacterium_35_26 organism_group=Bacteroidetes organism_desc=Good+ six scaffolds
SCNpilot_BF_INOC_scaffold_115_117
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(119845..120273)
DNA (429bp) protein (143aa)
50S ribosomal protein L16 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIR9_FLUTR
50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.
SCNpilot_BF_INOC_scaffold_115_118
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists


comp(120298..121023)
DNA (726bp) protein (242aa)
30S ribosomal protein S3 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIS0_FLUTR
30S ribosomal protein S3P; K02982 small subunit ribosomal protein S3 Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
30S ribosomal protein S3
SCNpilot_BF_INOC_scaffold_115_119
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(121032..121427)
DNA (396bp) protein (132aa)
50S ribosomal protein L22 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIS1_FLUTR
50S ribosomal protein L22P; K02890 large subunit ribosomal protein L22 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
50S ribosomal protein L22
SCNpilot_BF_INOC_scaffold_115_120
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(121441..121719)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIS2_FLUTR
30S ribosomal protein S19
30S ribosomal protein S19P; K02965 small subunit ribosomal protein S19 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Displaying items 91-120 of 138 in total

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