ggKbase home page

SCNpilot_BF_INOC_scaffold_36

Search features with annotation key words

Displaying items 31-60 of 363 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_36_31
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28982..32470
DNA (3489bp) protein (1163aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFT7_FLUTR
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
SCNpilot_BF_INOC_scaffold_36_32
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32875..38133
DNA (5259bp) protein (1753aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000375AB19
Uncharacterized protein {ECO:0000313|EMBL:KFC21236.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas la
outer membrane adhesin-like protein
SCNpilot_BF_INOC_scaffold_36_33
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38476..39051
DNA (576bp) protein (192aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9Q2_FLUTR
ECF subfamily RNA polymerase sigma-24 subunit Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_BF_INOC_scaffold_36_34
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

39038..40324
DNA (1287bp) protein (429aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_BF_INOC_scaffold_36_35
unknown

Not on your lists

40321..41379
DNA (1059bp) protein (353aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_36_36
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

41424..42494
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9Q0_FLUTR
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_36_37
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42573..43517)
DNA (945bp) protein (315aa)
Ribonuclease BN n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PET8_CHIPD
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:ACU57910.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (str
SCNpilot_BF_INOC_scaffold_36_38
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

43629..44846
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NR22_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC92515.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
membrane protein
SCNpilot_BF_INOC_scaffold_36_39
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44848..45867)
DNA (1020bp) protein (340aa)
Radical SAM domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAI5_FLUTR
Radical SAM domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Radical SAM domain-containing protein
SCNpilot_BF_INOC_scaffold_36_40
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45913..47730)
DNA (1818bp) protein (606aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11UA9_CYTH3
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_36_41
unknown

Not on your lists

47808..48275
DNA (468bp) protein (156aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_36_42
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48272..49648)
DNA (1377bp) protein (459aa)
Nucleoside transporter n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CHM6_ELIME
Nucleoside transporter {ECO:0000313|EMBL:EOR28802.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia me
Nucleoside permease NupG
SCNpilot_BF_INOC_scaffold_36_43
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(49654..50253)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJF6_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA42844.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (stra
SCNpilot_BF_INOC_scaffold_36_44
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(50669..51616)
DNA (948bp) protein (316aa)
Alpha/beta hydrolase fold protein n=2 Tax=Elizabethkingia anophelis RepID=H0KSE9_9FLAO
Alpha/beta hydrolase {ECO:0000313|EMBL:KFC38811.1}; TaxID=238 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningos
Lysophospholipase
SCNpilot_BF_INOC_scaffold_36_45
Capnocytophaga sp. oral taxon 338, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51679..52542)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 338 str. F0234 RepID=F0IIL9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EGD33021.1}; TaxID=888059 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp.
hypothetical protein
SCNpilot_BF_INOC_scaffold_36_46
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52559..54913)
DNA (2355bp) protein (785aa)
penicillin-binding protein 1C (EC:2.4.1.129); K05367 penicillin-binding protein 1C [EC:2.4.1.-] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
penicillin-binding protein 1C (EC:2.4.1.129)
Penicillin-binding protein 1C n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICB9_FLUTR
SCNpilot_BF_INOC_scaffold_36_47
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

55162..56370
DNA (1209bp) protein (403aa)
glutaryl-CoA dehydrogenase (EC:1.3.99.7)
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:AEA43341.1}; EC=1.3.8.6 {ECO:0000313|EMBL:AEA43341.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fl
Glutaryl-CoA dehydrogenase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICW7_FLUTR
SCNpilot_BF_INOC_scaffold_36_48
unknown

Not on your lists

comp(56539..57063)
DNA (525bp) protein (175aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_36_49
unknown

Not on your lists

comp(57214..57837)
DNA (624bp) protein (208aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_36_50
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

57895..63462
DNA (5568bp) protein (1856aa)
Alpha-2-macroglobulin domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICC3_FLUTR
alpha-2-macroglobulin domain-containing protein; K06894 Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
alpha-2-macroglobulin
SCNpilot_BF_INOC_scaffold_36_51
unknown

Not on your lists

63501..63632
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_36_52
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

63759..64490
DNA (732bp) protein (244aa)
FG-GAP repeat protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG95_FLUTR
hypothetical protein
FG-GAP repeat protein {ECO:0000313|EMBL:AEA45761.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain
SCNpilot_BF_INOC_scaffold_36_53
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

64875..65321
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SHQ9_PLABD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY59539.1}; Flags: Precursor;; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="
SCNpilot_BF_INOC_scaffold_36_54
unknown

Not on your lists

65500..66459
DNA (960bp) protein (320aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_36_55
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(66547..67287)
DNA (741bp) protein (247aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICC1_FLUTR
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
LytTR family two component transcriptional regulator
SCNpilot_BF_INOC_scaffold_36_56
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(67290..70328)
DNA (3039bp) protein (1013aa)
Signal transduction histidine kinase, LytS n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICC0_FLUTR
signal transduction histidine kinase LytS Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
signal transduction histidine kinase LytS
SCNpilot_BF_INOC_scaffold_36_57
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

70486..71166
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICW6_FLUTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA43340.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (stra
SCNpilot_BF_INOC_scaffold_36_58
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

71185..71946
DNA (762bp) protein (254aa)
uroporphyrinogen-III synthase (EC:4.2.1.75); K01719 uroporphyrinogen-III synthase [EC:4.2.1.75] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICW5_FLUTR
SCNpilot_BF_INOC_scaffold_36_59
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

71947..74550
DNA (2604bp) protein (868aa)
glycosyl transferase family 51; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Glycosyl transferase family 51 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICW4_FLUTR
glycosyl transferase 51
SCNpilot_BF_INOC_scaffold_36_60
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

74563..75264
DNA (702bp) protein (234aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5)
3-oxoacid CoA-transferase, A subunit {ECO:0000313|EMBL:AEA43337.1}; EC=2.8.3.5 {ECO:0000313|EMBL:AEA43337.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorp
3-oxoacid CoA-transferase, A subunit n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICW3_FLUTR
Displaying items 31-60 of 363 in total

View Taxonomy