ggKbase home page

SCNpilot_BF_INOC_scaffold_36

Search features with annotation key words

Displaying items 241-270 of 363 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_36_241
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

266378..268090
DNA (1713bp) protein (571aa)
Por secretion system C-terminal sorting domain-containing protein n=1 Tax=Flavobacterium sp. CF136 RepID=J3C1G1_9FLAO
regulator of chromosome condensation, RCC1 Tax=GWA2_Bacteroidetes_31_9_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_36_242
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

268285..269043
DNA (759bp) protein (253aa)
Helix-turn-helix, AraC domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IK55_FLUTR
AraC-type helix-turn-helix domain-containing protein {ECO:0000313|EMBL:GAL87397.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sp
AraC family transcriptional regulator
SCNpilot_BF_INOC_scaffold_36_243
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

269072..269548
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000360F5E6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFF26123.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
SCNpilot_BF_INOC_scaffold_36_244
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

269555..270703
DNA (1149bp) protein (383aa)
Monooxygenase; possible 2-polyprenyl-6-methoxyphenol hydroxylase n=1 Tax=unidentified eubacterium SCB49 RepID=A6EP37_9BACT
2-polyprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:KFF15833.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavo
FAD-binding monooxygenase
SCNpilot_BF_INOC_scaffold_36_245
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

270962..272230
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037C0E4A
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ACU61522.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" sourc
SCNpilot_BF_INOC_scaffold_36_246
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

272365..272934
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GZY0_FLAPJ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_36_247
Flavobacterium indicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

273003..273392
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) RepID=H8XP84_FLAIG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG53158.1}; TaxID=1094466 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium ind
SCNpilot_BF_INOC_scaffold_36_248
Prevotella sp. oral taxon 317, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

273439..274155
DNA (717bp) protein (239aa)
CAAX amino terminal protease family protein n=1 Tax=Prevotella sp. oral taxon 317 str. F0108 RepID=D3IFK1_9BACT
CAAX amino terminal protease self-immunity
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EFC68797.1}; TaxID=575615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella s
SCNpilot_BF_INOC_scaffold_36_249
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

274196..274897
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000368BAEB
ATP-binding domain-containing protein {ECO:0000313|EMBL:KEY18059.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chr
hypothetical protein
SCNpilot_BF_INOC_scaffold_36_250
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(274981..275934)
DNA (954bp) protein (318aa)
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGK6_FLUTR
SCNpilot_BF_INOC_scaffold_36_251
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

276037..276801
DNA (765bp) protein (255aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
4-diphosphocytidyl-2-c-methyl-d-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JT42_9BACT
SCNpilot_BF_INOC_scaffold_36_252
unknown

Not on your lists

comp(276726..277022)
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_36_253
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(277067..279301)
DNA (2235bp) protein (745aa)
FG-GAP repeat protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IGK4_FLUTR
hypothetical protein
FG-GAP repeat protein {ECO:0000313|EMBL:AEA42610.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicol
SCNpilot_BF_INOC_scaffold_36_254
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

279403..280356
DNA (954bp) protein (318aa)
PKD domain containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2II01_FLUTR
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:AEA42701.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="F
SCNpilot_BF_INOC_scaffold_36_255
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

280491..282719
DNA (2229bp) protein (743aa)
Peptidase M48 Ste24p n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIE3_FLUTR
peptidase M48 Ste24p Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
peptidase M48 Ste24p
SCNpilot_BF_INOC_scaffold_36_256
unknown

Not on your lists

282722..283525
DNA (804bp) protein (268aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_36_257
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

283581..285191
DNA (1611bp) protein (537aa)
Peptide chain release factor 3 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFS3_FLUTR
peptide chain release factor 3
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobact
SCNpilot_BF_INOC_scaffold_36_258
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(285214..285666)
DNA (453bp) protein (151aa)
Restriction endonuclease, type I, EcoRI, R subunit/Type III n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAA8_RUNSL
Restriction endonuclease, type I, EcoRI, R subunit/type III
Restriction endonuclease, type I, EcoRI, R subunit/Type III {ECO:0000313|EMBL:AEI47446.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Ru
SCNpilot_BF_INOC_scaffold_36_259
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(285663..288284)
DNA (2622bp) protein (874aa)
Cell division protein FtsK/SpoIIIE n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFR3_FLUTR
cell division protein FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
DNA translocase FtsK
SCNpilot_BF_INOC_scaffold_36_260
unknown

Not on your lists

comp(288422..289048)
DNA (627bp) protein (209aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_36_261
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

289131..290090
DNA (960bp) protein (320aa)
Arginase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S7A9_9FLAO
Arginase {ECO:0000313|EMBL:KGO97154.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
Arginase
SCNpilot_BF_INOC_scaffold_36_262
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


290094..292001
DNA (1908bp) protein (636aa)
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=755732 species="Bacteria; Bact
Arginine--tRNA ligase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFR7_FLUTR
SCNpilot_BF_INOC_scaffold_36_263
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(292186..292581)
DNA (396bp) protein (132aa)
Large conductance mechanosensitive channel protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBM0_FLUTR
large conductance mechanosensitive channel protein
Large-conductance mechanosensitive channel {ECO:0000256|SAAS:SAAS00023935}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluvi
SCNpilot_BF_INOC_scaffold_36_264
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(292639..293508)
DNA (870bp) protein (290aa)
Ion transport protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9K2_PEDSD
Ion transport protein
Ion transport protein {ECO:0000313|EMBL:ADY53555.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobac
SCNpilot_BF_INOC_scaffold_36_265
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(293556..294941)
DNA (1386bp) protein (462aa)
phosphomannomutase (EC:5.4.2.8); K01840 phosphomannomutase [EC:5.4.2.8] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
phosphoglucosamine mutase n=1 Tax=Aquimarina agarilytica RepID=UPI000288A489
phosphomannomutase
SCNpilot_BF_INOC_scaffold_36_266
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(294946..295437)
DNA (492bp) protein (164aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9N1_FLUTR
SCNpilot_BF_INOC_scaffold_36_267
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(295446..296075)
DNA (630bp) protein (210aa)
TPR domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2I9N2_FLUTR
TPR domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
TPR domain-containing protein
SCNpilot_BF_INOC_scaffold_36_268
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

296292..297431
DNA (1140bp) protein (380aa)
aspartate transaminase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
aspartate transaminase (EC:2.6.1.1)
Aspartate transaminase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICA2_FLUTR
SCNpilot_BF_INOC_scaffold_36_269
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

297474..298433
DNA (960bp) protein (320aa)
PfkB domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICA3_FLUTR
PfkB domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
PfkB domain-containing protein
SCNpilot_BF_INOC_scaffold_36_270
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

298430..299158
DNA (729bp) protein (243aa)
demethylmenaquinone methyltransferase (EC:2.1.1.-); K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
demethylmenaquinone methyltransferase (EC:2.1.1.-)
Demethylmenaquinone methyltransferase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2ICA4_FLUTR
Displaying items 241-270 of 363 in total

View Taxonomy