ggKbase home page

SCNpilot_BF_INOC_scaffold_237_27

Organism: SCNpilot_BF_INOC_Flavobacteriales_40_20

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 32604..33578

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHF5_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 324.0
  • Bit_score: 408
  • Evalue 8.60e-111
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 324.0
  • Bit_score: 408
  • Evalue 2.40e-111
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AEA43720.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 324.0
  • Bit_score: 408
  • Evalue 1.20e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fluviicola taffensis → Fluviicola → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 975
ATGAATGAACAAAGAGACAATCTGATCGTTTTTTTATGGAAGAAAAGAAAGCCAATCAGCATCATCACAGGAATTGGAGCTGTTATTTCGCTGGTCGTTTCATTTTTGATAACTCCGCTTTTTCTTTCAACCGCTATTATTTTCCCGACAGCAACCAGTACGGTTTCATTTTCCGAGCAGCGTAACGCCAAAGCCTCAGCGATGGACTTCGGTGAAGAAGAGCAGGCAGAGCAGATGCTTCAGATCCTGCAGTCTTCAAAGATCCGTGAATTAATCGTCAACCGGTTTAATCTGTTTGACCACTATGAGATCAAACAGGACGATCCGTACAAAAACTATAAGCTTGGAAAAGCATACAATGAGCACATCCAGTGCAGCAGAACAAAATACGGTTCTATTCAGATTGACGTGCTGGATAAAGACGCACAATTGGCTGCTGACATTGCCAATAAAATCGTTGATTTATATGACTCTGTAAAAAATGAAATGATCAAAGAACGTACAATTCCTGCGTTTGAGATCAATATTCGTAAACGCCAGATGATTGAGCAAAGTATCAATGATCTTTCCAAAAAGCTGGACAGCCTTTCTGAAATCGGTGTGGTTACCTCAGAAGCCCGAGCAAATCTTTTCGAAGCATATAACAGTGCTAAAAGTGCGGAAGATAAAAGTTTTTTCAAAGATAAAATTGATGTCAACCTGAAATTCGGAGCGGAATATGATGGTTTAGTGATGCTCCGTGATGAAAAGACCGTAAAGCTTTCTGATTTTGAAGCAATTTATGAACAGGCGGAATCAGATGCTTACGCTGATTTCAACCACAAATTCGTGGTTGAAAAAGCAGTAAAGGCAGACCGGAAAGAGAAGCCGAAAAAATCGATTATCATTCTTGTTGCTACGTTTGCGACCTTCTTCTTTGCTATTTTCTACTTCCTGATCGCAGAACGTCTTAAAGAATTAAGAAAAATAGCATAA
PROTEIN sequence
Length: 325
MNEQRDNLIVFLWKKRKPISIITGIGAVISLVVSFLITPLFLSTAIIFPTATSTVSFSEQRNAKASAMDFGEEEQAEQMLQILQSSKIRELIVNRFNLFDHYEIKQDDPYKNYKLGKAYNEHIQCSRTKYGSIQIDVLDKDAQLAADIANKIVDLYDSVKNEMIKERTIPAFEINIRKRQMIEQSINDLSKKLDSLSEIGVVTSEARANLFEAYNSAKSAEDKSFFKDKIDVNLKFGAEYDGLVMLRDEKTVKLSDFEAIYEQAESDAYADFNHKFVVEKAVKADRKEKPKKSIIILVATFATFFFAIFYFLIAERLKELRKIA*