ggKbase home page

SCNpilot_BF_INOC_scaffold_36_193

Organism: SCNpilot_BF_INOC_Flavobacteriales_40_20

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(219550..220806)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CDJ1_9LEPT similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 417.0
  • Bit_score: 489
  • Evalue 2.90e-135
TPR repeat protein {ECO:0000313|EMBL:GAO29651.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 418.0
  • Bit_score: 552
  • Evalue 3.90e-154
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 419.0
  • Bit_score: 480
  • Evalue 4.90e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1257
ATGCAAGACGACAACAGACTTAGAAAAGTCAGTATTTTATTTCAACAGAAAAAATACGCAGCAGCTGAGCGAATTTTAAAAGATTTACTTACAGAAGATACGAATAACATTCATTTTCTTTCTCTCCTTGCCGAAGCAAATTTGCAACAAGATAAATGTGATACAGCAATGAGTATAATTGACAATGCAATTGAGTTATCAAACTATTCATCATATTTATTCTACATAAAATCAAGAATTACAATTCAACAAGACAATTACGAAGAAGCAGAACAAAACATTAACCAAGCAATAAAATTAGACCCTGACGATGCTGATTATTTTGCGCTACTGGCTAGCATCAAATTGACAAGAAAACAATATAAACAAGCCTTAGAATTGGCAAACAAAGCGTTAGAGATTGATGCAGAAAATCTATTAGGATTAAACACAAGAAGCTCAGCCTTAATTAAATTAAACCGAAGTAAAGAATCATTTGAAACTATTGAAAGAGCGTTACGAGAAGATCCGAATAATGCTTACACTCACTCCAATTATGGTTGGAGTTTATTAGAAAAAGGTGACCATAGAAAAGCATTGGAGCACTTCAAAGAATCATTAAAAAACGACCCAAATTTTGAACATTCACAATCGGGAATGATTGAAGCATTAAAAGCAGGTAATCCGATTTACAAAGCATTTTTGAAATATGATTTTTGGATGAATAGCTTGACAGCCAAATATCAGTGGGCAGTTATTATCGGTTTTTATTTTGGAACAAGAGTCTTAAGAACAATCTCTAAAAACAACGATGCGTTACAGCCATACCTAACACCTTTGATTCTTTCACTTGCTTTCCTTGCGTTTTCAACCTGGATAATCACACCAATAAGCAATTTGTTTTTACGTTTCAATAGATATGGGCGGTTTTTACTTGACAAGAAAGAAAAAATGAGCTCCAACTTTGTTGCAGGAGCATTATCCACCTTTATTATTGGAGTTGTAACATACATTGTCTTGTCGGACGAAAAATTTCTGACAATTGCAGTTTTTGGTTTTGCAATGATGCTACCTTTCAGCGCAATGTTTTCAGCTTCTAAACCCAAAAACATCTTGCTCATTTATTCGATAACAATGGGAACTGTAGGAATTTTAGCAATCGTACAAACATTTATAACAGAGGAACTATTTAACCTAATGTCTTTTGTTTTTATTTTGGGTTTTGTAGCTTTTCAATGGCTCGTAAACTATTTACTAATCCAAGAAAATAACAAATAA
PROTEIN sequence
Length: 419
MQDDNRLRKVSILFQQKKYAAAERILKDLLTEDTNNIHFLSLLAEANLQQDKCDTAMSIIDNAIELSNYSSYLFYIKSRITIQQDNYEEAEQNINQAIKLDPDDADYFALLASIKLTRKQYKQALELANKALEIDAENLLGLNTRSSALIKLNRSKESFETIERALREDPNNAYTHSNYGWSLLEKGDHRKALEHFKESLKNDPNFEHSQSGMIEALKAGNPIYKAFLKYDFWMNSLTAKYQWAVIIGFYFGTRVLRTISKNNDALQPYLTPLILSLAFLAFSTWIITPISNLFLRFNRYGRFLLDKKEKMSSNFVAGALSTFIIGVVTYIVLSDEKFLTIAVFGFAMMLPFSAMFSASKPKNILLIYSITMGTVGILAIVQTFITEELFNLMSFVFILGFVAFQWLVNYLLIQENNK*