ggKbase home page

SCNpilot_BF_INOC_scaffold_220

Search features with annotation key words

Displaying items 31-60 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_220_31
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31713..33341)
DNA (1629bp) protein (543aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003816080
GMC oxidoreductase family protein Tax=RBG_13_Bacteroidetes_42_15_curated
GMC oxidoreductase family protein
SCNpilot_BF_INOC_scaffold_220_32
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33457..34485)
DNA (1029bp) protein (343aa)
Peptidase M28 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T550_PALPW
peptidase m28
Peptidase M28 {ECO:0000313|EMBL:ADQ79844.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter prop
SCNpilot_BF_INOC_scaffold_220_33
unknown

Not on your lists

comp(34540..34809)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_220_34
unknown

Not on your lists

comp(34905..35306)
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_220_35
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35418..36728)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI00036F4377
Ig domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:KGO91131.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sub
SCNpilot_BF_INOC_scaffold_220_36
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(36875..37345)
DNA (471bp) protein (157aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EVR2_EMTOG
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AFK03765.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia
SCNpilot_BF_INOC_scaffold_220_37
unknown

Not on your lists

comp(37389..37760)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_220_38
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37760..38245)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EDU3_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48219.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformi
SCNpilot_BF_INOC_scaffold_220_39
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(38259..39404)
DNA (1146bp) protein (382aa)
Geranylgeranyl reductase n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LHL7_9BACT
Geranylgeranyl reductase {ECO:0000313|EMBL:EJF08793.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
geranylgeranyl reductase
SCNpilot_BF_INOC_scaffold_220_40
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(39511..40128)
DNA (618bp) protein (206aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSX9_AEQSU
radical SAM superfamily protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
organic radical activating enzyme
SCNpilot_BF_INOC_scaffold_220_41
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(40130..40678)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00036E0891
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK02642.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM
SCNpilot_BF_INOC_scaffold_220_42
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

40769..42025
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG51_FLUTR
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_220_43
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

42105..42566
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Flavobacterium sp. MS220-5C RepID=UPI00034D7A95
NUDIX hydrolase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
NUDIX hydrolase
SCNpilot_BF_INOC_scaffold_220_44
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

42690..43634
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037B741A
Magnesium transporter CorA {ECO:0000313|EMBL:KGE85577.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodacty
Mg2 transporter protein CorA family protein
SCNpilot_BF_INOC_scaffold_220_45
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43631..44521)
DNA (891bp) protein (297aa)
Transketolase central region n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIH6_NIAKG
transketolase
Transketolase central region {ECO:0000313|EMBL:AEW01792.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreen
SCNpilot_BF_INOC_scaffold_220_46
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44527..45345)
DNA (819bp) protein (273aa)
Transketolase {ECO:0000313|EMBL:AEW01791.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AEW01791.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella
Transketolase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIH5_NIAKG
transketolase
SCNpilot_BF_INOC_scaffold_220_47
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

45441..46622
DNA (1182bp) protein (394aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransfera
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YGM4_9SPHI
SCNpilot_BF_INOC_scaffold_220_48
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(46679..47242)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1LK00_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB57070.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CC
hypothetical protein
SCNpilot_BF_INOC_scaffold_220_49
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(47323..48213)
DNA (891bp) protein (297aa)
1-Aminocyclopropane-1-carboxylate deaminase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANA2_IGNAJ
dcyD; 1-Aminocyclopropane-1-carboxylate deaminase
1-Aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:AFH50459.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" so
SCNpilot_BF_INOC_scaffold_220_50
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48210..48851)
DNA (642bp) protein (214aa)
Deoxyguanosine kinase/deoxyadenosine kinase subunit id=4470690 bin=GWF2_Bacteroidetes_35_48 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)/deoxynucleoside kinase Tax=GWF2_Bacteroidetes_35_48_curated
deoxynucleoside kinase
SCNpilot_BF_INOC_scaffold_220_51
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(48851..49246)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI000379C3C2
Uncharacterized protein {ECO:0000313|EMBL:KIC90049.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_BF_INOC_scaffold_220_52
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

49729..50226
DNA (498bp) protein (166aa)
Transcriptional regulator, AsnC family n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TRH9_MARTH
ArsR family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADR21700.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuos
SCNpilot_BF_INOC_scaffold_220_53
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

50252..51250
DNA (999bp) protein (333aa)
Zn-dependent alcohol dehydrogenase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KW17_SOLCM
Zn-dependent alcohol dehydrogenase rbh
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:AFD06920.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solital
SCNpilot_BF_INOC_scaffold_220_54
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(51260..52261)
DNA (1002bp) protein (334aa)
Nucleotidyl transferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PVA0_CHIPD
nucleotidyltransferase
Nucleotidyl transferase {ECO:0000313|EMBL:ACU64693.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
SCNpilot_BF_INOC_scaffold_220_55
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

52512..56483
DNA (3972bp) protein (1324aa)
Adhesin AidA-related {ECO:0000313|EMBL:CCH51821.1}; EC=3.2.1.- {ECO:0000313|EMBL:CCH51821.1};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" sou
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI0003671646
hypothetical protein
SCNpilot_BF_INOC_scaffold_220_56
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(56622..57491)
DNA (870bp) protein (290aa)
Isopropylmalate/homocitrate/citramalate synthase n=1 Tax=Saprospira grandis DSM 2844 RepID=J1I2B7_9SPHI
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:EJF52443.1}; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" sourc
hydroxymethylglutaryl-CoA lyase
SCNpilot_BF_INOC_scaffold_220_57
GWA2_Bdellovibrionales_49_15_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

57573..58493
DNA (921bp) protein (307aa)
Putative membrane protein id=1697268 bin=GWA2__Bacteriovorax-rel_49_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
Putative membrane protein Tax=GWA2_Bdellovibrionales_49_15_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_220_58
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

58490..59401
DNA (912bp) protein (304aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriacea
YhfJ n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BH97_ZUNPS
hypothetical protein
SCNpilot_BF_INOC_scaffold_220_59
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

59902..60489
DNA (588bp) protein (196aa)
Alcohol dehydrogenase cytochrome c subunit n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NX05_9BACT
Alcohol dehydrogenase cytochrome c subunit {ECO:0000313|EMBL:EMR02989.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribact
hypothetical protein
SCNpilot_BF_INOC_scaffold_220_60
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(60492..61205)
DNA (714bp) protein (238aa)
glycosyl transferase family protein (EC:2.4.1.-) Tax=GWF1_Flavobacteria_32_7_curated
glycosyl transferase family protein (EC:2.4.1.-)
Glycosyl transferase, group 2 family protein id=2836338 bin=GWF1_Flavobacteria_32_7 species=Flavobacterium branchiophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
Displaying items 31-60 of 74 in total

View Taxonomy