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SCNpilot_BF_INOC_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_397_1
Bacillus vireti, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

365..808
DNA (444bp) protein (148aa)
UPI0003D5D387 related cluster n=1 Tax=unknown RepID=UPI0003D5D387
Uncharacterized protein {ECO:0000313|EMBL:ETI66453.1}; TaxID=1131730 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus vireti LMG 21834.;"
thiol-disulfide oxidoreductase DCC
SCNpilot_BF_INOC_scaffold_397_2
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

954..4661
DNA (3708bp) protein (1236aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporoc
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Cytophaga aurantiaca RepID=UPI00037A9255
SCNpilot_BF_INOC_scaffold_397_3
unknown

Not on your lists

comp(4791..5312)
DNA (522bp) protein (174aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_397_4
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5552..9346
DNA (3795bp) protein (1265aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J1A8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EAZ96057.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_397_5
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

9460..11100
DNA (1641bp) protein (547aa)
NAD+ synthetase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KWW6_SOLCM
NAD+ synthetase
Tax=BJP_IG2103_Bacteroidetes_37_22
SCNpilot_BF_INOC_scaffold_397_6
RBG_19FT_COMBO_Bacteroidetes_42_10_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11112..12890)
DNA (1779bp) protein (593aa)
hypothetical protein Tax=RBG_19FT_COMBO_Bacteroidetes_42_10_curated
Putative uncharacterized protein id=4706659 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_397_7
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13075..14106)
DNA (1032bp) protein (344aa)
ruvB; Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=GWF2_Bacteroidetes_43_11_curated
Holliday junction ATP-dependent DNA helicase RuvB id=4645993 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
holliday junction DNA helicase ruvb
SCNpilot_BF_INOC_scaffold_397_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14127..15365)
DNA (1239bp) protein (413aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQE6_NIAKG
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacterial
ATP-dependent Clp protease ATP-binding subunit ClpX
SCNpilot_BF_INOC_scaffold_397_9
Thermodesulfobacterium commune, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(15452..16477)
DNA (1026bp) protein (342aa)
dehydrogenase n=1 Tax=Thermodesulfobacterium thermophilum RepID=UPI0003B74A00
dehydrogenase
Dehydrogenase {ECO:0000313|EMBL:AIH04365.1}; TaxID=289377 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermodesulfo
SCNpilot_BF_INOC_scaffold_397_10
unknown

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16720..18549
DNA (1830bp) protein (610aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_397_11
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18567..19646)
DNA (1080bp) protein (360aa)
Permease YjgP/YjgQ family protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5P481_9PORP
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:CCZ10893.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" s
permease YjgP/YjgQ family protein
SCNpilot_BF_INOC_scaffold_397_12
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19651..20781)
DNA (1131bp) protein (377aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J6Q9_9SPHI
SCNpilot_BF_INOC_scaffold_397_13
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20833..21930
DNA (1098bp) protein (366aa)
Glycosyl transferase family 2 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XT84_PEDHD
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACU03645.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter
SCNpilot_BF_INOC_scaffold_397_14
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21921..22529
DNA (609bp) protein (203aa)
RNA polymerase subunit sigma-24 n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A7017
Sigma-24 {ECO:0000313|EMBL:GAF02545.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM
sigma-70 family RNA polymerase sigma factor
SCNpilot_BF_INOC_scaffold_397_15
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22707..24776
DNA (2070bp) protein (690aa)
PAS sensor protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZR85_9EURY
PAS sensor protein {ECO:0000313|EMBL:ELY88995.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
PAS domain S-box
SCNpilot_BF_INOC_scaffold_397_16
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24878..25588
DNA (711bp) protein (237aa)
Thioredoxin domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IHR6_FLUTR
thioredoxin
Thioredoxin family protein {ECO:0000313|EMBL:AEW87259.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium
SCNpilot_BF_INOC_scaffold_397_17
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25631..26680
DNA (1050bp) protein (350aa)
Cellulase {ECO:0000313|EMBL:AEE51518.1}; EC=3.2.1.4 {ECO:0000313|EMBL:AEE51518.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobact
Cellulase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZU8_HALH1
cellulase
SCNpilot_BF_INOC_scaffold_397_18
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26967..28010
DNA (1044bp) protein (348aa)
ATP synthase subunit a n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RZW8_LEAB4
ATP synthase f0 subcomplex a subunit
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
SCNpilot_BF_INOC_scaffold_397_19
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

28045..28275
DNA (231bp) protein (77aa)
ATP synthase subunit C; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:755 RepID=R5GKL6_9BACT
ATP synthase F0 subunit C
SCNpilot_BF_INOC_scaffold_397_20
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28372..28896
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00036F36C6
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
ATP synthase F0 subunit b
SCNpilot_BF_INOC_scaffold_397_21
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

28905..29465
DNA (561bp) protein (187aa)
ATP synthase subunit delta n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TP09_NIAKG
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
ATP synthase F1 subcomplex subunit delta
SCNpilot_BF_INOC_scaffold_397_22
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29595..31124
DNA (1530bp) protein (510aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteria
Signal peptidase I id=1780035 bin=GWE2_Bacteroidetes_42_24 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
signal peptidase I
SCNpilot_BF_INOC_scaffold_397_23
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31185..31682
DNA (498bp) protein (166aa)
Ferric uptake regulator, Fur family n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TVL7_MARTH
ferric uptake regulator, fur family
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ADR21130.1}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa (
SCNpilot_BF_INOC_scaffold_397_24
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31674..32198)
DNA (525bp) protein (175aa)
methylated-DNA-protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=GWF2_Bacteroidetes_41_31_curated
methylated-DNA-[protein]-cysteine S-methyltransferase (EC:2.1.1.63)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs2 RepID=S6GQN1_9GAMM
SCNpilot_BF_INOC_scaffold_397_25
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32202..32591)
DNA (390bp) protein (130aa)
Response regulator receiver protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L5Z9_HALH1
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEE53059.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Hal
SCNpilot_BF_INOC_scaffold_397_26
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32849..35569
DNA (2721bp) protein (907aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=865937 species="Bacteria; Bacteroidetes; Flavo
citB; aconitate hydratase 1 (EC:4.2.1.3)
Aconitate hydratase 1 n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BTA6_9FLAO
SCNpilot_BF_INOC_scaffold_397_27
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

35624..36229
DNA (606bp) protein (202aa)
Transglutaminase n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6D3V7_BACAZ
Transglutaminase-like enzyme, predicted cysteine protease {ECO:0000313|EMBL:KEF39323.1}; TaxID=1348973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azo
transglutaminase-like enzyme, predicted cysteine protease
SCNpilot_BF_INOC_scaffold_397_28
unknown

Not on your lists

comp(36234..36623)
DNA (390bp) protein (130aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_397_29
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(36806..37051)
DNA (246bp) protein (82aa)
50S ribosomal protein L31 type B n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KWE1_HALH1
50S ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae;
SCNpilot_BF_INOC_scaffold_397_30
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(37206..39749)
DNA (2544bp) protein (848aa)
Cellulosome anchoring protein cohesin region id=4339521 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
Displaying items 1-30 of 38 in total

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