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SCNpilot_BF_INOC_scaffold_43

Search features with annotation key words

Displaying items 91-120 of 236 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_43_91
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

94032..94301
DNA (270bp) protein (90aa)
Nitrogen-fixing NifU domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9H7_PEDSD
nitrogen-fixing NifU domain-containing protein
Nitrogen-fixing NifU domain protein {ECO:0000313|EMBL:ADY53530.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source=
SCNpilot_BF_INOC_scaffold_43_92
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

94301..95122
DNA (822bp) protein (274aa)
Orotidine 5'-phosphate decarboxylase PyrF n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IGH1_PSYTT
orotidine 5'-phosphate decarboxylase PyrF
Orotidine 5'-phosphate decarboxylase PyrF {ECO:0000313|EMBL:AFU69602.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Ps
SCNpilot_BF_INOC_scaffold_43_93
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

95164..95955
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036DED1F
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
SCNpilot_BF_INOC_scaffold_43_94
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

95975..96868
DNA (894bp) protein (298aa)
Putative uncharacterized protein id=4507310 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein Tax=GWA2_Bacteroidetes_32_17_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_43_95
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

96880..97500
DNA (621bp) protein (207aa)
Phosphoglycerate mutase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YC42_9SPHI
Phosphoglycerate mutase {ECO:0000313|EMBL:EHQ29605.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginib
phosphoglycerate mutase
SCNpilot_BF_INOC_scaffold_43_96
Geminocystis sp. NIES-3708, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

97569..98411
DNA (843bp) protein (281aa)
Copper homeostasis protein CutF n=1 Tax=Cecembia lonarensis LW9 RepID=K1L6B3_9BACT
Lipoprotein {ECO:0000313|EMBL:BAQ60760.1}; TaxID=1615909 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3708.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_43_97
unknown

Not on your lists

98912..99418
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_43_98

Not on your lists

99568..101412
DNA (1845bp) protein (615aa)
Sensor protein (histidine kinase C-terminal domain) (EC:2.7.13.3)
Chemotaxis protein methyltransferase CheR n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2D8W0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN41659.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_BF_INOC_scaffold_43_99
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

101512..103953
DNA (2442bp) protein (814aa)
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I (EC:2.7.2.4)
aspartokinase n=1 Tax=Cytophaga aurantiaca RepID=UPI00037B620C
Aspartate kinase {ECO:0000313|EMBL:KIF34296.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
SCNpilot_BF_INOC_scaffold_43_100
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

104147..105622
DNA (1476bp) protein (492aa)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y5Z3_9SPHI
biotin carboxylase
Biotin carboxylase {ECO:0000313|EMBL:AKD04837.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
SCNpilot_BF_INOC_scaffold_43_101
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(105661..107061)
DNA (1401bp) protein (467aa)
Fumarate hydratase class II (EC:4.2.1.2)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=755732 species="Bacteria; Bacte
Fumarate hydratase class II n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDE5_FLUTR
SCNpilot_BF_INOC_scaffold_43_102
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(107198..108310)
DNA (1113bp) protein (371aa)
TraR/DksA family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Histone protein id=4395369 bin=GWF2_Bacteroidetes_35_48 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
TraR/DksA family transcriptional regulator
SCNpilot_BF_INOC_scaffold_43_103
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

108534..109112
DNA (579bp) protein (193aa)
Transcriptional regulator, TetR family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SAR8_PEDSD
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADY53689.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" sour
SCNpilot_BF_INOC_scaffold_43_104
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

109128..110456
DNA (1329bp) protein (443aa)
Outer membrane efflux protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G4E3_9SPHI
Outer membrane efflux protein {ECO:0000313|EMBL:EEI89944.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphin
outer membrane efflux protein
SCNpilot_BF_INOC_scaffold_43_105
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

110565..111608
DNA (1044bp) protein (348aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C797_SPHS2
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADZ80172.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;"
SCNpilot_BF_INOC_scaffold_43_106
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

111643..114777
DNA (3135bp) protein (1045aa)
RND transporter, HAE1 family n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VMD5_9SPHI
RND transporter, HAE1 family {ECO:0000313|EMBL:EFK58140.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphing
RND transporter
SCNpilot_BF_INOC_scaffold_43_107
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(114917..116659)
DNA (1743bp) protein (581aa)
Sodium:solute symporter family protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JRT1_9BACT
Sodium:solute symporter family protein {ECO:0000313|EMBL:ELR71570.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtec
Na+/proline symporter
SCNpilot_BF_INOC_scaffold_43_108
Bacteroides helcogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

116778..117563
DNA (786bp) protein (262aa)
Exonuclease RNase T and DNA polymerase III n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SPM6_BACT6
Exonuclease RNase T and DNA polymerase III
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:ADV43867.1}; TaxID=693979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides
SCNpilot_BF_INOC_scaffold_43_109
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(117725..118042)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00036FBF07
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGE87755.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source=
regulatory protein ArsR
SCNpilot_BF_INOC_scaffold_43_110
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(118137..118487)
DNA (351bp) protein (117aa)
Transcriptional regulator, ArsR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL99_CHIPD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACU58443.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chi
SCNpilot_BF_INOC_scaffold_43_111
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(118635..119534)
DNA (900bp) protein (300aa)
Putative uncharacterized protein id=3807303 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein Tax=GWA2_Bacteroidetes_32_17_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_43_112
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(119531..120316)
DNA (786bp) protein (262aa)
inositol-phosphate phosphatase (EC:3.1.3.25)
Inositol-phosphate phosphatase {ECO:0000313|EMBL:ACK42179.1}; EC=3.1.3.25 {ECO:0000313|EMBL:ACK42179.1};; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;"
Inositol-phosphate phosphatase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E151_DICTD
SCNpilot_BF_INOC_scaffold_43_113
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(120316..120930)
DNA (615bp) protein (205aa)
phosphoheptose isomerase (EC:5.3.1.-) Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
sugar isomerase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B471A3
sugar isomerase (SIS)
SCNpilot_BF_INOC_scaffold_43_114
RHI_RIF-OD1-04_45_11b, RIF-OD1-4, Parcubacteria, Bacteria

Not on your lists

comp(120936..122450)
DNA (1515bp) protein (505aa)
ADP-heptose synthase Tax=RIFCSPHIGHO2_12_FULL_RIF-OD1-04_45_11b_curated
ADP-heptose synthase id=4585818 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cytidyltransferase
SCNpilot_BF_INOC_scaffold_43_115
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

122588..123490
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZYZ7_9BACT
FkbM family methyltransferase Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
FkbM family methyltransferase
SCNpilot_BF_INOC_scaffold_43_116
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

123442..124713
DNA (1272bp) protein (424aa)
hypothetical protein Tax=RBG_16_Planctomycetes_41_13_curated
SCNpilot_BF_INOC_scaffold_43_117
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

Not on your lists

124710..125702
DNA (993bp) protein (331aa)
dehydratase-like protein; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=GWF2_Melainabacteria_32_7_curated
NAD dependent epimerase/dehydratase n=2 Tax=Acetivibrio cellulolyticus RepID=UPI0002481AC0
wcaG; nucleoside-diphosphate-sugar epimerase
SCNpilot_BF_INOC_scaffold_43_118
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(125724..126806)
DNA (1083bp) protein (361aa)
O-methyltransferase n=1 Tax=Cytophaga aurantiaca RepID=UPI00035F7630
type 12 methyltransferase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
type 12 methyltransferase
SCNpilot_BF_INOC_scaffold_43_119
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

127019..127495
DNA (477bp) protein (159aa)
hypothetical protein Tax=GWA2_Bacteroidetes_32_17_curated
Putative uncharacterized protein id=3681222 bin=GWF2_Bacteroidetes_35_48 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
SCNpilot_BF_INOC_scaffold_43_120
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

127646..129271
DNA (1626bp) protein (542aa)
1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Balneola vulgaris RepID=UPI0003781BE7
1-pyrroline-5-carboxylate dehydrogenase
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:AKD02375.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlen
Displaying items 91-120 of 236 in total

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