ggKbase home page

SCNpilot_BF_INOC_scaffold_54

Search features with annotation key words

Displaying items 121-150 of 288 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_54_121
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

126879..127781
DNA (903bp) protein (301aa)
chromosome partitioning protein ParB n=1 Tax=Cytophaga aurantiaca RepID=UPI00037BE444
spoOJ; chromosome partitioning protein
Chromosome partitioning protein {ECO:0000313|EMBL:ABG59814.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (stra
SCNpilot_BF_INOC_scaffold_54_122
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

127836..128177
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AQH4_CHLCH
Uncharacterized protein {ECO:0000313|EMBL:GAO42202.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
SCNpilot_BF_INOC_scaffold_54_123
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(128180..131575)
DNA (3396bp) protein (1132aa)
Uncharacterized protein n=1 Tax=Saprospira grandis DSM 2844 RepID=J1I540_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EJF53870.1}; Flags: Precursor;; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Sap
hypothetical protein
SCNpilot_BF_INOC_scaffold_54_124
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

131737..132027
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GI77_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH53602.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_54_125
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(132024..133649)
DNA (1626bp) protein (542aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:ACU63944.1}; EC=3.4.21.102 {ECO:0000313|EMBL:ACU63944.1};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacte
Carboxyl-terminal protease n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL34_CHIPD
carboxyl-terminal protease
SCNpilot_BF_INOC_scaffold_54_126
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

133770..134498
DNA (729bp) protein (243aa)
dehydrogenase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=CG_Ignavi_01
ial:IALB_0439 dehydrogenase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=719380 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
dehydrogenase
SCNpilot_BF_INOC_scaffold_54_127
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(134505..135125)
DNA (621bp) protein (207aa)
Recombination protein RecR n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL48_CHIPD
recR; recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chit
SCNpilot_BF_INOC_scaffold_54_128
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(135245..136999)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J0R6_9FLAO
putative stress-responsive transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_54_129
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(137026..137358)
DNA (333bp) protein (111aa)
Putative PadR-family transcriptional regulatory protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J0R5_9FLAO
Putative PadR-family transcriptional regulatory protein {ECO:0000313|EMBL:EAZ95841.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacteriu
transcriptional regulator, PadR-like family
SCNpilot_BF_INOC_scaffold_54_130
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

137796..138617
DNA (822bp) protein (274aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyt
enoyl-ACP reductase n=1 Tax=Spirosoma panaciterrae RepID=UPI000380B948
enoyl-ACP reductase
SCNpilot_BF_INOC_scaffold_54_131
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(138614..139276)
DNA (663bp) protein (221aa)
pcm; protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_cura
pcm; protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Gramella forsetii (strain KT0803) RepID=PIMT_GRAFK
SCNpilot_BF_INOC_scaffold_54_132
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

139366..140259
DNA (894bp) protein (298aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T437_PALPW
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ADQ79481.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" so
SCNpilot_BF_INOC_scaffold_54_133
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

140326..142221
DNA (1896bp) protein (632aa)
Putative glycosyltransferase id=3925952 bin=GWF2_Bacteroidetes_35_48 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
putative glycosyltransferase Tax=GWF2_Bacteroidetes_35_48_curated
glycosyl transferase family 2
SCNpilot_BF_INOC_scaffold_54_134
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(142230..143150)
DNA (921bp) protein (307aa)
Esterase/lipase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIE0_CHLTF
esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:AEP11598.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
SCNpilot_BF_INOC_scaffold_54_135
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(143231..144403)
DNA (1173bp) protein (391aa)
Membrane-bound metallopeptidase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMT0_SOLCM
membrane-bound metallopeptidase
Membrane-bound metallopeptidase {ECO:0000313|EMBL:AFD09333.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;"
SCNpilot_BF_INOC_scaffold_54_136
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(144513..145325)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003637FE4
Uncharacterized protein {ECO:0000313|EMBL:AHM62580.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirga
hypothetical protein
SCNpilot_BF_INOC_scaffold_54_137
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(145336..146076)
DNA (741bp) protein (247aa)
ABC transporter ATP-binding protein n=1 Tax=Lewinella cohaerens RepID=UPI00036C7A80
lipopolysaccharide ABC-type transporter, ATPase component LptB
Lipopolysaccharide ABC-type transporter, ATPase component LptB {ECO:0000313|EMBL:AFU69352.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychr
SCNpilot_BF_INOC_scaffold_54_138
unknown

Not on your lists

146229..148016
DNA (1788bp) protein (596aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_54_139
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

148023..148538
DNA (516bp) protein (172aa)
thioesterase n=1 Tax=Pedobacter arcticus RepID=UPI0003654EFC
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ACU03478.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobact
SCNpilot_BF_INOC_scaffold_54_140
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

148617..149657
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00037360CC
Uncharacterized protein {ECO:0000313|EMBL:KJS07550.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_54_141
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

149792..153331
DNA (3540bp) protein (1180aa)
chromosome segregation protein SMC n=1 Tax=Cytophagales str. B6 RepID=UPI0003B313A0
chromosome segregation protein smc
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuosa
SCNpilot_BF_INOC_scaffold_54_142
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

153505..153843
DNA (339bp) protein (113aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAY5_FLUTR
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEA45309.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorpha
SCNpilot_BF_INOC_scaffold_54_143
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

153847..154689
DNA (843bp) protein (281aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAY5_FLUTR
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEA45309.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorpha
SCNpilot_BF_INOC_scaffold_54_144
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

154631..154864
DNA (234bp) protein (78aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAY5_FLUTR
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AEA45309.1}; Flags: Precursor;; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorpha
SCNpilot_BF_INOC_scaffold_54_145
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

154981..156633
DNA (1653bp) protein (551aa)
Phenylacetic acid degradation protein paaN n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNT7_CHIPD
phenylacetic acid degradation protein paaN
Phenylacetic acid degradation protein paaN {ECO:0000313|EMBL:ACU58634.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
SCNpilot_BF_INOC_scaffold_54_146
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

156730..157620
DNA (891bp) protein (297aa)
putative SAM-dependent methyltransferase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Putative SAM-dependent methyltransferase id=4543984 bin=GWF2_Bacteroidetes_35_48 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
SAM dependent methyltransferase
SCNpilot_BF_INOC_scaffold_54_147
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

157766..159067
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036AB619
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_BF_INOC_scaffold_54_148
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

159060..159701
DNA (642bp) protein (214aa)
LmbE family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IA18_FLUTR
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:AEA44176.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain D
SCNpilot_BF_INOC_scaffold_54_149
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

159718..160635
DNA (918bp) protein (306aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
Transferase hexapeptide repeat (EC:2.3.1.129)
Putative UDP-3-O-(3-hydroxymyristoyl) glucosamin N-acyltransferase id=2080280 bin=GWE2_Bacteroidetes_42_24 species=Bacteroides salyersiae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
SCNpilot_BF_INOC_scaffold_54_150
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

160894..161979
DNA (1086bp) protein (362aa)
acyltransferase 3 Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Acyltransferase 3 id=1761081 bin=GWD2_Bacteroidetes_40_43 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
acyltransferase
Displaying items 121-150 of 288 in total

View Taxonomy