ggKbase home page

SCNpilot_BF_INOC_scaffold_140_66

Organism: SCNpilot_BF_INOC_Bacteroidetes_37_82

near complete RP 52 / 55 BSCG 49 / 51 ASCG 14 / 38
Location: 67391..68008

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Pedobacter agri RepID=UPI00029ADC5B similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 205.0
  • Bit_score: 286
  • Evalue 2.40e-74
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 205.0
  • Bit_score: 288
  • Evalue 6.70e-75
50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 205.0
  • Bit_score: 284
  • Evalue 3.30e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 618
ATGAAAGGAATTATTGGTAAAAAAGTTGGCATGACAAGTGTTTTCGATAATGGAAAGCACCTTGCCGTAACTGTGGTTCAAGCTGGACCATGTGTAATTACTCAAGTTAAAACTGAAGAAACTGATGGCTACAATGCTGTGCAGTTAGCTTTTGACGAGAAGAAAGAAAAAAATACTACAAAACCATTAGTAGGTCATTTTAAGAAAGCAAATACTACTCCTAAAAGAAAAGTAGTTGAAATCCGCAACTTTGATTTAGGAGGAAACTTAGGAGATGTTTTAAGTGCTGATGTATTTAGCGTAGGCGAAAAAATTAGCGTTGTTGGCATCTCTAAAGGAAAAGGATTTCAAGGTGTTGTAAAGCGCCACGGATTTAGTGGTGTTGGTATGGGCTCTCACGGGCAACATGACCGCCAACGTGCTCCGGGTTCTGTGGGTGCATCATCTGATCCAAGCCGTGTTTTGAAAGGATTAAGAATGGCAGGAAGAATGGGAGGCGAGCGCGTGAAAGTTGCTAACCTTAAAGTAGTACAAGTATTGGCTGATAAGAACATTATCCTTGTAAAAGGCGCTGTTCCTGGACATAATGGCTCTTATGTAGTTATTGAAAGCCTTTAG
PROTEIN sequence
Length: 206
MKGIIGKKVGMTSVFDNGKHLAVTVVQAGPCVITQVKTEETDGYNAVQLAFDEKKEKNTTKPLVGHFKKANTTPKRKVVEIRNFDLGGNLGDVLSADVFSVGEKISVVGISKGKGFQGVVKRHGFSGVGMGSHGQHDRQRAPGSVGASSDPSRVLKGLRMAGRMGGERVKVANLKVVQVLADKNIILVKGAVPGHNGSYVVIESL*