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SCNpilot_BF_INOC_scaffold_148_8

Organism: SCNpilot_BF_INOC_Bacteroidetes_37_82

near complete RP 52 / 55 BSCG 49 / 51 ASCG 14 / 38
Location: comp(6948..7547)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EL95_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 191.0
  • Bit_score: 171
  • Evalue 8.30e-40
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 191.0
  • Bit_score: 171
  • Evalue 2.30e-40
Regulatory protein TetR {ECO:0000313|EMBL:AEI51864.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 2953 similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 191.0
  • Bit_score: 171
  • Evalue 1.20e-39

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 600
ATGCCTAAGCAAAAGGTTGATGAGCAATATATTATTATCCAATCGCTGATTCTATTCCGCCAGCGGAGTTTCCACAGCACCAGCATGAGCGATATTGCAAAAGCGTGTGGCATTTTAAAGGGAAGTCTTTACCATTATTTTAAAAGCAAAGAAGAGTTGATGGAAAAGGTAATTCGCTATGTGCATCAATACTTTAAAGTAGAGGTTTTTGCAAAAGCATACGAAGAAAATATTCCGGCCAACCAACGATTTAAGAATATGATGAAGGCTTCGGAGAAGATTTTTTTTGATGCTTCAACCGGAAAAATGTATGGCAATATGGGTGTAGAAAGTGCTTTAGTAATCCCGGAATTCAACCCAATAATTCGAGAGTTTTTTCAAGATTTTTTTAATGCTATTAAACATATTTATGCTGATAAATATGCTGAAGAAATTGCTAATGAATTAGCAGAAAGAAGTGTGGCAGAAGTGGAAGGAAGTATAATGATGTCGCGTGTTTTTAACGATAAAAGTTATATTAAAAACACACACAAACGCTTGCTTTCACGCATCGAAAAATCTACTGAAAAGCAAGAGAAATTAAGCGACTCAATTGTATAG
PROTEIN sequence
Length: 200
MPKQKVDEQYIIIQSLILFRQRSFHSTSMSDIAKACGILKGSLYHYFKSKEELMEKVIRYVHQYFKVEVFAKAYEENIPANQRFKNMMKASEKIFFDASTGKMYGNMGVESALVIPEFNPIIREFFQDFFNAIKHIYADKYAEEIANELAERSVAEVEGSIMMSRVFNDKSYIKNTHKRLLSRIEKSTEKQEKLSDSIV*