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SCNpilot_BF_INOC_scaffold_54_231

Organism: SCNpilot_BF_INOC_Bacteroidetes_37_82

near complete RP 52 / 55 BSCG 49 / 51 ASCG 14 / 38
Location: comp(254986..255666)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YSZ9_AEQSU similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 211.0
  • Bit_score: 203
  • Evalue 2.90e-49
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 211.0
  • Bit_score: 203
  • Evalue 8.20e-50
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AFL80117.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="A similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 211.0
  • Bit_score: 203
  • Evalue 4.10e-49

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Taxonomy

Aequorivita sublithincola → Aequorivita → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 681
ATGCAGTCAAAAAACAACAAGCAATCTCAAACTTTAAGCATTACAAACGAGCAACTTTTACAGCGTATCCTTAACGGAGAAAAAGAACTGTTTGAGTTGTTGATGGAGCGTAACAATCAACAGCTTTATAGGGTAATTAGAAGCTATGTAAAAGAGGAAGAAAGTGCACACGATGTAATGCAGAATACTTACATTAAAGCATACACCCATTTGGCACAATTTCACCAAGATGCTTCTTTTACAACTTGGCTTATTCGTATTGGTATAAACGAAGCATTACACTATATAAAATCTTCAAAGAAAAATATTAACTCCGTTTCGGTAGAAACAGATGAGGCTGAAAATAAGTTACCGGAAGTTGAAATTGAAACTACAACACCCGAGAAAACGACAATTCAACATGAAACATTTGCTTTTATTGAACATGCAATCAATAATTTACCTGAAAAATATAGAGCAGTTTTTATGCTTCGCGAAATTGAAGGTTTAAGTAGCGAGGAAACTGCAGCATGTTTAGAGCTTACAGAAAGCAATGTAAAGGTGCGATTGTTTAGAGCCAAGAATTTATTGAGAGCAGAATTGCACAATTTAACCTCTGAGTTTATGGTATATCCATTAGCCGAACATCATTGCAGAAACGTAAGAAGTGTAGTGATGGATAAAATTTCTATGGTAAAATAG
PROTEIN sequence
Length: 227
MQSKNNKQSQTLSITNEQLLQRILNGEKELFELLMERNNQQLYRVIRSYVKEEESAHDVMQNTYIKAYTHLAQFHQDASFTTWLIRIGINEALHYIKSSKKNINSVSVETDEAENKLPEVEIETTTPEKTTIQHETFAFIEHAINNLPEKYRAVFMLREIEGLSSEETAACLELTESNVKVRLFRAKNLLRAELHNLTSEFMVYPLAEHHCRNVRSVVMDKISMVK*