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SCNpilot_BF_INOC_scaffold_201

Search features with annotation key words

Displaying items 31-60 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_201_31
Burkholderia sp. USM B20, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42445..43356
DNA (912bp) protein (304aa)
Protein FdhE homolog n=1 Tax=Burkholderia cenocepacia KC-01 RepID=V4ZM78_9BURK
Protein FdhE homolog {ECO:0000256|HAMAP-Rule:MF_00611}; TaxID=1571773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp.
formate dehydrogenase accessory protein FdhE
SCNpilot_BF_INOC_scaffold_201_32
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43358..44782
DNA (1425bp) protein (475aa)
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine sy
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382105A
SCNpilot_BF_INOC_scaffold_201_33
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44779..46710
DNA (1932bp) protein (644aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F9DEE
Translation elongation factor {ECO:0000313|EMBL:KHD19719.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
selB; selenocysteine-specific translation elongation factor
SCNpilot_BF_INOC_scaffold_201_34
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46836..47891
DNA (1056bp) protein (352aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:000
Selenide, water dikinase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WV13_9BURK
segregation protein A
SCNpilot_BF_INOC_scaffold_201_35
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47945..49348)
DNA (1404bp) protein (468aa)
Transporter {ECO:0000313|EMBL:KGM55664.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.
Citrate transporter id=2528239 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
H+/gluconate symporter family protein
SCNpilot_BF_INOC_scaffold_201_36
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49509..51749
DNA (2241bp) protein (747aa)
Putative tonB-dependent receptor bfrD n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CYK8_STEMA
TonB-dependent receptor {ECO:0000313|EMBL:KGM57251.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenici
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_201_37
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51964..55290
DNA (3327bp) protein (1109aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM55666.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeon
Multi-sensor hybrid histidine kinase id=2528229 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_201_38
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55348..55959)
DNA (612bp) protein (204aa)
NODE_78, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98245.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
SCNpilot_BF_INOC_scaffold_201_39
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56176..57039
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031BCDF1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY97295.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (str
SCNpilot_BF_INOC_scaffold_201_40
unknown

Not on your lists

comp(57298..57552)
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_201_41
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57759..58418)
DNA (660bp) protein (220aa)
Response regulator gacA n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CMA9_STEMA
LuxR family transcriptional regulator {ECO:0000313|EMBL:KGM52115.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
two component LuxR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_201_42
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58447..59211)
DNA (765bp) protein (255aa)
3-hydroxybutyrate dehydrogenase n=1 Tax=Xanthomonas sacchari RepID=UPI000262B4EA
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:KGQ19237.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter
3-hydroxybutyrate dehydrogenase
SCNpilot_BF_INOC_scaffold_201_43
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59458..61149
DNA (1692bp) protein (564aa)
hydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B63DCE
Uncharacterized protein {ECO:0000313|EMBL:KGM52116.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concret
hydrogenase
SCNpilot_BF_INOC_scaffold_201_44
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61437..62339)
DNA (903bp) protein (301aa)
membrane protein n=1 Tax=Nevskia ramosa RepID=UPI0003B31D89
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBJ50302.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (
SCNpilot_BF_INOC_scaffold_201_45
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62551..63312)
DNA (762bp) protein (254aa)
ABC transporter n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2FU92_9GAMM
ABC transport system permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax
SCNpilot_BF_INOC_scaffold_201_46
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63309..64235)
DNA (927bp) protein (309aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PEV7_9DELT
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFG69920.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source
ABC-type multidrug transport system
SCNpilot_BF_INOC_scaffold_201_47
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64457..66331
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036E12AB
Uncharacterized protein {ECO:0000313|EMBL:KGD88116.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp.
peptidase C14 caspase catalytic subunit p20
SCNpilot_BF_INOC_scaffold_201_48
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

66313..67206
DNA (894bp) protein (298aa)
V8-like Glu-specific endopeptidase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IZ29_9BACT
serine peptidase
Serine peptidase {ECO:0000313|EMBL:AHF89906.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
SCNpilot_BF_INOC_scaffold_201_49
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67229..69781)
DNA (2553bp) protein (851aa)
metallophosphoesterase n=1 Tax=Rudaea cellulosilytica RepID=UPI00037BC3BA
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AJC47046.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari
SCNpilot_BF_INOC_scaffold_201_50
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69805..71205)
DNA (1401bp) protein (467aa)
type 12 methyltransferase n=1 Tax=Rudaea cellulosilytica RepID=UPI000364C71E
methyltransferase type 12
Methyltransferase type 12 {ECO:0000313|EMBL:AJC47047.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacch
SCNpilot_BF_INOC_scaffold_201_51
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(71241..72278)
DNA (1038bp) protein (346aa)
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal-phosphate cyclase; K01974 RNA 3'-terminal phosphate cyclase [EC:6.5.1.4] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI00036DE6E2
SCNpilot_BF_INOC_scaffold_201_52
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72307..73005)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036BB657
Variovorax paradoxus strain MEDvA23 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27479.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
hypothetical protein
SCNpilot_BF_INOC_scaffold_201_53
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73022..74245)
DNA (1224bp) protein (408aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
RNA-splicing ligase RtcB n=1 Tax=Caulobacter sp. AP07 RepID=J2GFN7_9CAUL
RtcB protein
SCNpilot_BF_INOC_scaffold_201_54
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74698..76314
DNA (1617bp) protein (539aa)
Fis family transcriptional regulator n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI00036E0D67
Fis family transcriptional regulator {ECO:0000313|EMBL:EYR68424.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysob
transcriptional regulator
SCNpilot_BF_INOC_scaffold_201_55
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76676..78136)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ADP7_COLFT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK63589.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivor
SCNpilot_BF_INOC_scaffold_201_56
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78286..79461)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349A3D0
Membrane protease subunit
Membrane protease subunit {ECO:0000313|EMBL:AIY40126.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.
SCNpilot_BF_INOC_scaffold_201_57
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79828..80658)
DNA (831bp) protein (277aa)
Putative transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J3A7C0_9CAUL
XRE family transcriptional regulator {ECO:0000313|EMBL:KGF79646.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia
DNA-binding protein
SCNpilot_BF_INOC_scaffold_201_58
unknown

Not on your lists

81036..81395
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_201_59
unknown

Not on your lists

comp(81450..81614)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_201_60
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82131..85097
DNA (2967bp) protein (989aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036F03B1
Uncharacterized protein {ECO:0000313|EMBL:KDP73309.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="E
hypothetical protein
Displaying items 31-60 of 87 in total

View Taxonomy