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SCNpilot_BF_INOC_scaffold_304

Search features with annotation key words

Displaying items 61-90 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_304_61
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67437..67937
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003646ECF
accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=GWF1_Xanthomonadales_69_6_curated
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
SCNpilot_BF_INOC_scaffold_304_62
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68408..69775
DNA (1368bp) protein (456aa)
acetyl-CoA carboxylase (EC:6.4.1.2)
acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Rudaea cellulosilytica RepID=UPI0003732FE3
Acetyl-CoA carboxylase {ECO:0000313|EMBL:GAN44934.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacte
SCNpilot_BF_INOC_scaffold_304_63
unknown

Not on your lists

69762..70184
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_304_64
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70198..71082
DNA (885bp) protein (295aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
ribosomal protein L11 methyltransferase n=1 Tax=Dyella japonica RepID=UPI0002D905CB
ribosomal protein L11 methyltransferase
SCNpilot_BF_INOC_scaffold_304_65
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71197..71988
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D9165C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF45820.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_BF_INOC_scaffold_304_66
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72114..72425
DNA (312bp) protein (104aa)
Fis family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI000346B768
Fis family transcriptional regulator {ECO:0000313|EMBL:GAN45852.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="
Fis family transcriptional regulator
SCNpilot_BF_INOC_scaffold_304_67
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72527..74104
DNA (1578bp) protein (526aa)
Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase n=1 Tax=mine drainage metagenome RepID=T1CGY7_9ZZZZ
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase
SCNpilot_BF_INOC_scaffold_304_68
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74179..74586)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000349FB4C
Protein of unknown function (DUF2782)
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_304_69
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74937..77681
DNA (2745bp) protein (915aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Dyella ginsengisoli RepID=UPI00037C8D09
DNA polymerase I {ECO:0000313|EMBL:GAN44936.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedi
SCNpilot_BF_INOC_scaffold_304_70
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78095..78856)
DNA (762bp) protein (254aa)
short chain dehydrogenase Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
Short chain dehydrogenase id=3038409 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
short chain dehydrogenase
SCNpilot_BF_INOC_scaffold_304_71
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79006..79812
DNA (807bp) protein (269aa)
short-chain dehydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3ECBE
Uncharacterized protein {ECO:0000313|EMBL:KFN45849.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli
short chain dehydrogenase
SCNpilot_BF_INOC_scaffold_304_72
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79809..80855
DNA (1047bp) protein (349aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN48765.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae
Uncharacterized protein id=3038401 bin=GWF1_Xanthomonadales_69_6 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
putative saccharopine dehydrogenase
SCNpilot_BF_INOC_scaffold_304_73

Not on your lists

81004..81567
DNA (564bp) protein (188aa)
Protein belonging to Uncharacterized protein family UPF0114 n=2 Tax=mine drainage metagenome RepID=T1AID0_9ZZZZ
Protein belonging to Uncharacterized protein family UPF0114 {ECO:0000313|EMBL:EQD60261.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage me
hypothetical protein
SCNpilot_BF_INOC_scaffold_304_74
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(81592..82995)
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380F47A
Uncharacterized protein {ECO:0000313|EMBL:GAN44939.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
SCNpilot_BF_INOC_scaffold_304_75
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83011..85266
DNA (2256bp) protein (752aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dye
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A7F70
uvrD; DNA-dependent helicase II
SCNpilot_BF_INOC_scaffold_304_76
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(85306..86496)
DNA (1191bp) protein (397aa)
putative glycosyltransferase (group 1) n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C497D
Uncharacterized protein {ECO:0000313|EMBL:KIJ75148.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_304_77
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86493..87575)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5368C
Uncharacterized protein {ECO:0000313|EMBL:KFN44607.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
group 1 glycosyl transferase
SCNpilot_BF_INOC_scaffold_304_78
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87619..88227)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B4B736
Uncharacterized protein {ECO:0000313|EMBL:KFN44608.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
methyltransferase, FkbM family domain protein
SCNpilot_BF_INOC_scaffold_304_79
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(88227..89402)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K8Q2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH00505.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_BF_INOC_scaffold_304_80

Not on your lists

89496..90038
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1J7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGC72435.1}; TaxID=1256558 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_2037.;"
SCNpilot_BF_INOC_scaffold_304_81
unknown

Not on your lists

90042..91397
DNA (1356bp) protein (452aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_304_82
unknown

Not on your lists

91414..91779
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_304_83
Paenibacillus popilliae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

91776..94448
DNA (2673bp) protein (891aa)
Predicted glycosyltransferase n=1 Tax=Paenibacillus popilliae ATCC 14706 RepID=M9LR88_PAEPP
Predicted glycosyltransferase {ECO:0000313|EMBL:GAC43756.1}; TaxID=1212764 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus popilliae ATCC 1
family 2 glycosyl transferase
SCNpilot_BF_INOC_scaffold_304_84
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

94445..95929
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000362BC9A
Uncharacterized protein {ECO:0000313|EMBL:KJB95862.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
family 2 glycosyl transferase
SCNpilot_BF_INOC_scaffold_304_85
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

95926..96960
DNA (1035bp) protein (345aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=391038 species="Bacter
GDP-mannose 4,6-dehydratase n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JT54_BURP8
GDP-mannose 4,6-dehydratase
SCNpilot_BF_INOC_scaffold_304_86
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96957..99191
DNA (2235bp) protein (745aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000376B74C
Putative Glycosyl transferase WbpY {ECO:0000313|EMBL:CDH45569.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candida
mannosyltransferase
SCNpilot_BF_INOC_scaffold_304_87
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(99208..101937)
DNA (2730bp) protein (910aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036B2476
hypothetical protein Tax=RBG_16_Chloroflexi_54_18_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_304_88
unknown

Not on your lists

comp(102077..102736)
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_304_89
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102820..103515)
DNA (696bp) protein (232aa)
Protein containing DUF980 n=3 Tax=mine drainage metagenome RepID=T1CLK7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KFL37109.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
hypothetical protein
SCNpilot_BF_INOC_scaffold_304_90
unknown

Not on your lists

comp(103652..104041)
DNA (390bp) protein (130aa)

This feature has no annotations

Displaying items 61-90 of 93 in total

View Taxonomy