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SCNpilot_BF_INOC_scaffold_32

Search features with annotation key words

Displaying items 121-150 of 360 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_32_121
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138247..139209)
DNA (963bp) protein (321aa)
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
proline iminopeptidase n=1 Tax=Dyella ginsengisoli RepID=UPI00034CA3B0
proline iminopeptidase
SCNpilot_BF_INOC_scaffold_32_122
unknown

Not on your lists

comp(139270..139911)
DNA (642bp) protein (214aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_32_123
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139908..140852)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037719B3
Uncharacterized protein {ECO:0000313|EMBL:EYR65814.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici
bacterial regulatory helix-turn-helix s, AraC family protein
SCNpilot_BF_INOC_scaffold_32_124
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142166..142522)
DNA (357bp) protein (119aa)
MerR family transcriptional regulator n=1 Tax=Rudaea cellulosilytica RepID=UPI00036731E9
Putative transcriptional regulator {ECO:0000313|EMBL:EIL96015.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
putative transcriptional regulator
SCNpilot_BF_INOC_scaffold_32_125
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142497..142802)
DNA (306bp) protein (102aa)
Integration host factor subunit alpha n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VXB8_9GAMM
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1163408 species="Bacteria; Proteobacte
ihfA; integration host factor subunit alpha
SCNpilot_BF_INOC_scaffold_32_126
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(142804..145176)
DNA (2373bp) protein (791aa)
phenylalanyl-tRNA synthetase, beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003693E00
SCNpilot_BF_INOC_scaffold_32_127
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(145217..146212)
DNA (996bp) protein (332aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
phenylalanyl-tRNA synthetase n=1 Tax=Dyella ginsengisoli RepID=UPI00034693ED
phenylalanyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_32_128
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(146424..146783)
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Rudaea cellulosilytica RepID=UPI000375EEA3
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dye
SCNpilot_BF_INOC_scaffold_32_129
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(146799..146996)
DNA (198bp) protein (66aa)
Ribosomal protein L35 n=1 Tax=mine drainage metagenome RepID=T1A7E8_9ZZZZ
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lys
LSU ribosomal protein L35P
SCNpilot_BF_INOC_scaffold_32_130
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147159..147623)
DNA (465bp) protein (155aa)
translation initiation factor IF-3 n=1 Tax=Rudaea cellulosilytica RepID=UPI00036FEDB4
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonada
translation initiation factor IF-3
SCNpilot_BF_INOC_scaffold_32_131
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147732..149636)
DNA (1905bp) protein (635aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=GWF1_Xanthomonadales_69_6_curated
threonyl-tRNA synthetase n=1 Tax=Rudaea cellulosilytica RepID=UPI000364302E
threonyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_32_132
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149990..151153
DNA (1164bp) protein (388aa)
Ferri-bacillibactin esterase BesA n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MYE7_CORCM
besA; Ferri-bacillibactin esterase BesA
Ferri-bacillibactin esterase BesA {ECO:0000313|EMBL:AFE08189.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" s
SCNpilot_BF_INOC_scaffold_32_133
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(151244..153376)
DNA (2133bp) protein (711aa)
Glr0280 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NNX8_GLOVI
hypothetical protein
Glr0280 protein {ECO:0000313|EMBL:BAC88221.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
SCNpilot_BF_INOC_scaffold_32_134
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(153814..154365)
DNA (552bp) protein (184aa)
NADPH-dependent FMN reductase n=2 Tax=Alicycliphilus denitrificans RepID=E8TQV2_ALIDB
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:AEB84988.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
SCNpilot_BF_INOC_scaffold_32_135
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155038..157065)
DNA (2028bp) protein (676aa)
excinuclease ABC subunit B n=1 Tax=Rudaea cellulosilytica RepID=UPI000379B436
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
excinuclease ABC subunit B
SCNpilot_BF_INOC_scaffold_32_136
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157379..157927
DNA (549bp) protein (183aa)
Type IV fimbrial biogenesis protein FimT n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BY09_9GAMM
prepilin-type N-terminal cleavage/methylation domain-containing protein Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
prepilin-type N-terminal cleavage/methylation domain-containing protein
SCNpilot_BF_INOC_scaffold_32_137
unknown

Not on your lists

158628..158810
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_32_138
unknown

Not on your lists

comp(159344..159877)
DNA (534bp) protein (178aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_32_139
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160330..161727)
DNA (1398bp) protein (466aa)
LOG family protein ygdH n=1 Tax=Dyella ginsengisoli RepID=UPI000349852A
LOG family protein
LOG family protein {ECO:0000313|EMBL:AHX12308.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_BF_INOC_scaffold_32_140
unknown

Not on your lists

162396..162902
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_32_141
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162978..166178)
DNA (3201bp) protein (1067aa)
TonB-dependent receptor plug n=1 Tax=mine drainage metagenome PF3_9ZZZZ">RepID=T0YPF3_9ZZZZ
Oar protein {ECO:0000313|EMBL:GAN45219.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis
Oar protein
SCNpilot_BF_INOC_scaffold_32_142
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166386..168125)
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000369B048
putative hemolysin
Tax=BJP_08E140C01_Xanthomonadales_64_42
SCNpilot_BF_INOC_scaffold_32_143
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(168379..168987)
DNA (609bp) protein (203aa)
Multiple antibiotic transporter n=2 Tax=Rhodanobacter denitrificans RepID=M4NGJ6_9GAMM
multiple antibiotic transporter Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
multiple antibiotic transporter
SCNpilot_BF_INOC_scaffold_32_144
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169018..169776)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000367DA15
Short-chain dehydrogenase {ECO:0000313|EMBL:KJV30957.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeoj
short-chain dehydrogenase
SCNpilot_BF_INOC_scaffold_32_145
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169776..170093)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000376596A
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sedimi
hypothetical protein
SCNpilot_BF_INOC_scaffold_32_146
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170257..170835
DNA (579bp) protein (193aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadac
superoxide dismutase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3858C
superoxide dismutase
SCNpilot_BF_INOC_scaffold_32_147
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170899..172053)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000382C16E
phosphoribosylaminoimidazole carboxylase
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
SCNpilot_BF_INOC_scaffold_32_148
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172050..172559)
DNA (510bp) protein (170aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5945B
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
purE; phosphoribosylaminoimidazole carboxylase catalytic subunit
SCNpilot_BF_INOC_scaffold_32_149
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172618..172884
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00037EA558
Uncharacterized protein {ECO:0000313|EMBL:GAN45222.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
SCNpilot_BF_INOC_scaffold_32_150
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172972..175317
DNA (2346bp) protein (782aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000380C2D8
Uncharacterized protein {ECO:0000313|EMBL:GAN45223.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
Displaying items 121-150 of 360 in total

View Taxonomy