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SCNpilot_BF_INOC_scaffold_66

Search features with annotation key words

Displaying items 121-150 of 175 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_66_121
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140375..141742)
DNA (1368bp) protein (456aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WLZ8_9GAMM
SCNpilot_BF_INOC_scaffold_66_122
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(141729..143066)
DNA (1338bp) protein (446aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003461171
Uncharacterized protein {ECO:0000313|EMBL:KGI77279.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas s
hypothetical protein
SCNpilot_BF_INOC_scaffold_66_123
unknown

Not on your lists

comp(143264..143701)
DNA (438bp) protein (146aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_66_124
unknown

Not on your lists

comp(143795..144247)
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_66_125
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144247..146847)
DNA (2601bp) protein (867aa)
Diaminopimelate decarboxylase {ECO:0000313|EMBL:AGG90263.1}; EC=2.7.2.4 {ECO:0000313|EMBL:AGG90263.1};; EC=4.1.1.20 {ECO:0000313|EMBL:AGG90263.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gamm
aspartate kinase (EC:4.1.1.20 2.7.2.4)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000374D3C0
SCNpilot_BF_INOC_scaffold_66_126
unknown

Not on your lists

146938..147189
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_66_127
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(147296..148435)
DNA (1140bp) protein (380aa)
Ig domain protein, group 1 domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021V3_SOLUE
Bacterial Ig-like domain (Group 1) {ECO:0000313|EMBL:CEE12398.1}; Putative lipoprotein, rSAM/lipoprotein system {ECO:0000313|EMBL:CDZ76660.1}; Flags: Precursor;; TaxID=1034943 species="Bacteria; Prote
Ig domain-containing protein
SCNpilot_BF_INOC_scaffold_66_128
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148693..150357)
DNA (1665bp) protein (555aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL36610.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghae
amidohydrolase
Amidohydrolase 3 id=2595778 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
SCNpilot_BF_INOC_scaffold_66_129
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150520..151833
DNA (1314bp) protein (438aa)
Amino acid transporter n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC63_9GAMM
Amino acid permease {ECO:0000313|EMBL:KGI77307.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.
amino acid permease
SCNpilot_BF_INOC_scaffold_66_130
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

151943..152533
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003638B04
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KJV29668.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeoju
(2Fe-2S)-binding
SCNpilot_BF_INOC_scaffold_66_131
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152530..154776
DNA (2247bp) protein (749aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036D0EB0
Aldehyde oxidase {ECO:0000313|EMBL:KGI77282.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
SCNpilot_BF_INOC_scaffold_66_132
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(155014..156093)
DNA (1080bp) protein (360aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonad
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W151_9GAMM
SCNpilot_BF_INOC_scaffold_66_133
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(156090..157277)
DNA (1188bp) protein (396aa)
O-succinylhomoserine (thiol)-lyase (EC:2.5.1.48)
O-succinylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:AGG87801.1}; EC=2.5.1.48 {ECO:0000313|EMBL:AGG87801.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xa
O-succinylhomoserine (Thiol)-lyase n=1 Tax=Rhodanobacter denitrificans RepID=I4WT24_9GAMM
SCNpilot_BF_INOC_scaffold_66_134
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157294..158346)
DNA (1053bp) protein (351aa)
Homoserine O-acetyltransferase {ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.- {ECO:0000256|SAAS:SAAS00276255};; EC=2.3.1.31 {ECO:0000256|SAAS:SAAS00070942};; TaxID=1217721 species="Bacteria; Proteobacter
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031712EB
alpha/beta hydrolase
SCNpilot_BF_INOC_scaffold_66_135
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158731..159774
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00036E3879
peptidase M23 Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
peptidase M23
SCNpilot_BF_INOC_scaffold_66_136
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159835..161688
DNA (1854bp) protein (618aa)
peptide chain release factor 3 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B71CBD
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1121015 species="Bacteria; Proteobacteria; Gammapr
peptide chain release factor 3
SCNpilot_BF_INOC_scaffold_66_137
unknown

Not on your lists

comp(161768..162304)
DNA (537bp) protein (179aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_66_138
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(162297..162851)
DNA (555bp) protein (185aa)
hypothetical protein Tax=RBG_16_Aminicenantes_63_16_curated
hypothetical protein id=8266991 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
SCNpilot_BF_INOC_scaffold_66_139

Not on your lists

comp(163066..163494)
DNA (429bp) protein (143aa)
Signal transduction protein with CBS domain protein n=1 Tax=mine drainage metagenome RepID=T0YJT9_9ZZZZ
Signal transduction protein with CBS domain protein {ECO:0000313|EMBL:EQD38374.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome
histidine kinase
SCNpilot_BF_INOC_scaffold_66_140
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(163770..166433)
DNA (2664bp) protein (888aa)
Glycosyl hydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022A7_SOLUE
glycosyl hydrolase
Glycosyl hydrolase {ECO:0000313|EMBL:ABJ84196.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soli
SCNpilot_BF_INOC_scaffold_66_141
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(166725..167666)
DNA (942bp) protein (314aa)
bactoprenol glucosyl transferase n=1 Tax=Rudaea cellulosilytica RepID=UPI000366D98F
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL95908.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobac
glycosyl transferase family protein
SCNpilot_BF_INOC_scaffold_66_142
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167776..168498)
DNA (723bp) protein (241aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodanobacter denitrificans RepID=U3GKL7_9GAMM
monofunctional biosynthetic peptidoglycan transglycosylase
SCNpilot_BF_INOC_scaffold_66_143
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168693..169583
DNA (891bp) protein (297aa)
Disulfide bond chaperone n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG89_9GAMM
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter s
disulfide bond chaperone
SCNpilot_BF_INOC_scaffold_66_144
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169702..172668)
DNA (2967bp) protein (989aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000314896F
Diguanylate cyclase {ECO:0000313|EMBL:GAN45634.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter s
diguanylate cyclase
SCNpilot_BF_INOC_scaffold_66_145
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172878..173933
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WH87_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAN45633.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
SCNpilot_BF_INOC_scaffold_66_146
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174371..177253
DNA (2883bp) protein (961aa)
TonB-denpendent receptor n=1 Tax=Xanthomonas sacchari RepID=UPI00026319AF
TonB-dependent receptor {ECO:0000313|EMBL:GAN45632.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
TonB-dependent receptor
SCNpilot_BF_INOC_scaffold_66_147
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177419..179230
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363E58D
Uncharacterized protein {ECO:0000313|EMBL:GAN45631.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
SCNpilot_BF_INOC_scaffold_66_148
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179295..180269
DNA (975bp) protein (325aa)
SecC motif-containing protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
SecC motif-containing protein id=2595769 bin=GWF1_Xanthomonadales_69_6 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
SecC motif-containing protein
SCNpilot_BF_INOC_scaffold_66_149
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(180330..181778)
DNA (1449bp) protein (483aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F6440
NAD(P) transhydrogenase subunit beta
SCNpilot_BF_INOC_scaffold_66_150
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181778..182074)
DNA (297bp) protein (99aa)
NAD(P) transhydrogenase n=1 Tax=Rudaea cellulosilytica RepID=UPI000373FD66
Uncharacterized protein {ECO:0000313|EMBL:EIJ44249.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
NAD(P) transhydrogenase
Displaying items 121-150 of 175 in total

View Taxonomy