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SCNpilot_BF_INOC_scaffold_231_25

Organism: SCNpilot_BF_INOC_Xanthomonadales_67_72

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 23502..24635

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037018B3 similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 370.0
  • Bit_score: 395
  • Evalue 5.10e-107
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 365.0
  • Bit_score: 329
  • Evalue 1.70e-87
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:AEB59708.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 365.0
  • Bit_score: 329
  • Evalue 8.30e-87

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Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1134
ATGCGCGCCCCTGTCGCCCCCAGCCTGTCGAACCGACTGCGTCGTCTGGGACTAGGCCTGGTTCTGATCCTGCCCACGCTCGTGCTCGTTTCCGGCTGCAATTCCCGCGCCGAAGTGCAGGAGCCCATACGCCCCGCCATCGTCGCCCGCCCGCAGTCGGCCGCCGCCGAAGCAGGCTCTCTTTATAGTGGTGACGTCAAGGCCCGTTACGAAAGCGCCCTGGGTTTTCGCGTCGGCGGCAAGATCCGCCAGCGCCGCGTCGACGTCGGCGCCCATGTCAAAGCCGGCGATCTGATCGCCGAACTCGACCCGCAAGACCTCCATCTCCAGGCCAGCAGCGCTCAGGCGACGCTGGCCGCCGCCGAGGCCGATCTGGCCACGGCCCGCTCGGAACGCTCGCGCTACGAAGCGCTGCGCGGCAAGAATTTCGTCAGCGAAACCCAGTTCGACGCAGTCGACAACCGTCTCAAGGCGGCGACCGCGCGCGCCGCCGAGGCTCGCGCCGCACTGAATGTCGCGCAGAACCAGGCCGGCTACAGCGAACTGCGCGCCGACCACGACGGCATCATCACCACCATCGTGGCCGAAGCCGGCCAGGTCGTCGCCCCGGGCCAGACCATTGCGACCCTGGCGCGCGACGGCGAACGCGAAGTCGAGATCAGCGTGCCCGAGAGCCGCATCGCCGACTATCGCAAGGACCAGGCTGCGACGATCGAGCTCTGGGCCGAGTCGGGCAAGCATCTGGCCGGCGTGCTGCGCGAGATCGCGCCTGAGGCCGATACCACGACGCGCACCTATCGCGTCCGCGTGACTCTCGGCGAAGACGCCGGCCAGGCCAAGCTCGGCCAGACCGCACGCGTGTTCTTCAGCGGCAGCGAAAGTGCCGCCGCCCACCTCGTGCCGCTGGCTTCGCTCTATGAAAAAGACGGCAAGCCGGCGGTCTGGGTGCTCGATCCCAAGACGCGCCAGGTGCACCTCAAGCCGGTCACGGTCGGCGCCTATCGCGAACAGGGCGTCGTGCTGATGGACGGCGTCGACACGCAGGACTGGATTGTCGCCGCCGGCGTGCACAAGTTGCGCGAAGGCCAGGCCATCAACCCGGTCGATCACAGCAACAAGCCGCTGACCTTGTAA
PROTEIN sequence
Length: 378
MRAPVAPSLSNRLRRLGLGLVLILPTLVLVSGCNSRAEVQEPIRPAIVARPQSAAAEAGSLYSGDVKARYESALGFRVGGKIRQRRVDVGAHVKAGDLIAELDPQDLHLQASSAQATLAAAEADLATARSERSRYEALRGKNFVSETQFDAVDNRLKAATARAAEARAALNVAQNQAGYSELRADHDGIITTIVAEAGQVVAPGQTIATLARDGEREVEISVPESRIADYRKDQAATIELWAESGKHLAGVLREIAPEADTTTRTYRVRVTLGEDAGQAKLGQTARVFFSGSESAAAHLVPLASLYEKDGKPAVWVLDPKTRQVHLKPVTVGAYREQGVVLMDGVDTQDWIVAAGVHKLREGQAINPVDHSNKPLTL*