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SCNpilot_BF_INOC_scaffold_306_47

Organism: SCNpilot_BF_INOC_Xanthomonadales_67_72

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 56854..57396

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6Y9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 162.0
  • Bit_score: 222
  • Evalue 2.80e-55
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EIL95230.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 162.0
  • Bit_score: 222
  • Evalue 4.00e-55
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 166.0
  • Bit_score: 135
  • Evalue 1.70e-29

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGACCGAAGCGGGGGAAACGGCAGGCCCGCCACAGGGCGGCGATGCGCTGTTCGCGGCGGTCTATGCGCGGCTCAAGGCCATGGCCGGGCGCGCGCTGGACCGGGCTTCCAGCTCCACGCTCGACACCACGGCGCTTGTGCATGAGCTATACCTGCGCGTCGGCGCACGCGACGAGCTGCAGTTCGAGCATCCGCATCAGTTCTTCGCCTATGCGGCGCGGGCCATGCGCCATCTGCTGGCCGACCGCGCGCGCGACCGCCTGCGCCTGCGCGCCGGCGGCGACTGGCAGCGCGTCACCCTGAGCGGCGTCGACGACGGCCTGGCGCTGCATACCGGCGAACAGGCGCTGGCGCTGGACGCGGCGCTGCAGCGGCTGGAACAGATCGACGCGCGCGCCGCCCAGGTCGTCGAGCTGCGCTACTTCGCCGGCCTTACCCAGGAACAGATCGGTGAACAGCTCGGCTGCACGCGGCGCACCGCCGATCGCGACTGGCGCTTCGCGCGGGCGTTCCTGAAGTCCGAGCTGCAGACGCAGGACTGA
PROTEIN sequence
Length: 181
MTEAGETAGPPQGGDALFAAVYARLKAMAGRALDRASSSTLDTTALVHELYLRVGARDELQFEHPHQFFAYAARAMRHLLADRARDRLRLRAGGDWQRVTLSGVDDGLALHTGEQALALDAALQRLEQIDARAAQVVELRYFAGLTQEQIGEQLGCTRRTADRDWRFARAFLKSELQTQD*