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SCNpilot_BF_INOC_scaffold_42_51

Organism: SCNpilot_BF_INOC_Xanthomonadales_67_72

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 64831..66039

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WTL3_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 385.0
  • Bit_score: 416
  • Evalue 3.90e-113
Acriflavin resistance protein AcrA {ECO:0000313|EMBL:KGM57626.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobact similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 388.0
  • Bit_score: 430
  • Evalue 2.80e-117
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 385.0
  • Bit_score: 416
  • Evalue 1.10e-113

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Taxonomy

Lysobacter arseniciresistens → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1209
ATGCAAGCCAAAACCACGATTCCCGTCTGGCCCGCGCTGGCCAATGCCGGCCTGCTGATGCTGCTCGGCATTGCCCTGGCCGGTTGCAGCCACTCGGGGCCGCCGCCGCAGATGCCGCCGCCGCAGGTCAGCGTCGCGACGGTGGTGCAGAAGGACGTGACGCTCTGGGACGAGTTCACCGGCCGCATCGAGGCCGTCGACAAGGTCGAAGTGCGCCCGCGCGTCGCCGGCTATCTCGACAAGGTCAATTTCGAGGAAGGCCGCCAGGTCAGGAAGGGCGACCTGCTGTTCCAGATCGACGACCGCGAATACCGCGCTGCGCATTCGCGCGCCACGGCCGAAGTCGAACGCGCCCGCTCGCGCGCCGCGCTGGCCCAGCGCCAGCTCGAACGCTCGCGCCAGCTCGTCGCGAACAAGCTCGTCGCGCGCAATGACGTGGACCTGCGCGAGGACGAGCTGGCCCAGGCCCTGGCCGACGTCAAGGCGACCCAGGCCGCGGCCGAGCAGGCGCGTCTGAACCTCGAGTTCACGCGCGTGACCGCACCGATCGACGGCCGCGTCGGCAAGGCGCTGGTAACACCGGGCAACCTCGTCGCGCCGGGCAGTTCGCTGCTGACGACGGTGGTCTCGATGGACCCGGTCTATGTGAGTTTCGAGGGCGACGAGAACACCTATCTGCGCTACCAGGGCCTGGAGCGCGCCGGCGAGCTGCCGAGCGCGCGCGAGGCCGGCAATCCGGTGCGCATGGGGCTGGCCGACGAGGAAGGCTTCCCGCATACGGGCAGCATGAACTTCATCGACAACGAGCTCGATGCAGGCACCGGCACGATCCGCGCGCGCGCCGTGTTCTCGAACAAGGACGGCCGCTTCACGCCGGGCCTGTTCGCGCGCGTGCAGCTGCTCGGCAGCGGCGCCCAGTCGGCACTGCTGATCAGCGACCGCGCCGTGCTGACCGACCAGGACCGCAAGTTCGTCTACGTGATCGGCCCGGAGAACAAAGCACTGCGCCGCGACGTCAAGCTCGGCGCCCAGGTCGACGGCCTGCGCATCGTGACCGACGGCCTCGCGGCGAACGACCGCATCGTCGTCAACGGCGTGCAGAAGGTGTTCTTCCCGGGCATGCCGGTGGATCCGCAGCCGGTTCCGATGGAGAAGCCCGAGCAGGCGCCGGCGGTGGCTGCGGTGGGCGGGGGGGCTTTGATTTTCTGA
PROTEIN sequence
Length: 403
MQAKTTIPVWPALANAGLLMLLGIALAGCSHSGPPPQMPPPQVSVATVVQKDVTLWDEFTGRIEAVDKVEVRPRVAGYLDKVNFEEGRQVRKGDLLFQIDDREYRAAHSRATAEVERARSRAALAQRQLERSRQLVANKLVARNDVDLREDELAQALADVKATQAAAEQARLNLEFTRVTAPIDGRVGKALVTPGNLVAPGSSLLTTVVSMDPVYVSFEGDENTYLRYQGLERAGELPSAREAGNPVRMGLADEEGFPHTGSMNFIDNELDAGTGTIRARAVFSNKDGRFTPGLFARVQLLGSGAQSALLISDRAVLTDQDRKFVYVIGPENKALRRDVKLGAQVDGLRIVTDGLAANDRIVVNGVQKVFFPGMPVDPQPVPMEKPEQAPAVAAVGGGALIF*