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SCNpilot_BF_INOC_scaffold_69_48

Organism: SCNpilot_BF_INOC_Xanthomonadales_67_72

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(53428..58167)

Top 3 Functional Annotations

Value Algorithm Source
type IV secretion protein Rhs n=1 Tax=Xanthomonas sacchari RepID=UPI000262A179 similarity UNIREF
DB: UNIREF100
  • Identity: 34.7
  • Coverage: 999.99
  • Bit_score: 639
  • Evalue 6.50e-180
RHS repeat-associated core domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 900.0
  • Bit_score: 619
  • Evalue 3.40e-174
RHS repeat-associated core domain-containing protein {ECO:0000313|EMBL:AEM50359.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophom similarity UNIPROT
DB: UniProtKB
  • Identity: 39.3
  • Coverage: 900.0
  • Bit_score: 619
  • Evalue 1.70e-173

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Taxonomy

Stenotrophomonas maltophilia → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4740
ATGCTGCTTGCCCTGGCAGCGGTCATTCCGGGCGCCGTACAGGCGCAGCTCTGGGAATGTGTCGCCAGCGGCGGAGCGGCGCAATGTCCCAGGCCCGAGACGACGGACTTCGCATGCCAGGGGACGTTCGTGAACGCCGATTCGCAACCCTGTTCCGGTATCGACTCGCCCGGACCGAAATGCAAGACCGAAGGCGAAGCGCTGGACCAGGCCATCGACAACTATTCCCAGGCGCCGCCGCCGCCCTGCACGCGTCCGAGCTATGGCGGCCTCTGTCCGTCGGTGTGGAATCCGGTCGAGACGGAGTTCGATCTCGGCGAGCTGTACTGGATCAAGCACGGTTACGTCCAGAACATTCCCTCGCTGACCGACGGCCAATGCGTCACGTACTCATTTCCCGAATGCGGCAACCACACCGTCGGGGACCAGTTCTTCGGCGCAATCGGCAACTGTTTGCGACGCGTCTACTGCCCGCCGGGCAGTGCACGAGTCGGCGATGTCTGTAAGGTTGCGCGCTCGAAGGTCTGTGAACTCGGCAACCCGATGGACTGCGTCACCGGAGAGAAGACGCAAGTCGAGCGCGATATTCGCGCGGCCGGCGCCAGTCCGCTCGAATTCGTGCGCTACTACTCGAGTTCGAGCTTCTACGAACCGCGCGGCAGCGGAGCGCAGAATCCGGACGATCACCATCACCGCATCCTCGGCCCGAACTGGCGCCATACCTACCAGCGGGCGATTGCGCCGGAGCCCTTCGTCGACGGGCAGCCGCCGGTGGTGACGGTACTGCGACACGACGGCGACTATCACTACTTCCGCTGGATCGACGGGGCGTGGGCCGGCAGTACGGACGAGCCAGAGGCGCTGCGCGACATCATCAAGCTGGGCCAGCGCGCCGGCTGGGAGTTCCGGACGGCAAGCGATGAGGTGGAAATCTACGACCTGCAGGGCCGGCTGCTGGCGATCAGCTATCCGACCGGCGAGGCGCTCAAGCTGCTCTACAGCACCATCGCGACGCCTGCCGCCGTCGCGCCGTTCGAGGGTCTGCTGGTCCGTGTCGAGGACTCCCGCGGCCGCGCGCTGGAACTGCAGTACGACACGCTGGCGCGTCTGGTCCGCGTGATCGATGCGGCCGGAGCAGTGCACGAATACCAGTACAGCGAGGGCCACGCGCTCACCGGCGTGACGCGGCCCGGCGGTGCGGTGCGCAGCTATCTGTACAACGAACCCGCGCACAATCTGAACTACATTGCCGGCACGCTGCTGACCGGCATCGTCGACGAAAACGGCGATCGCTACGGCACCTATCGCTATTCGCACAGCCGCGTCAACGATGAATGGCACGGCTCGGACTATGCCGACCGGCTCACGATCACCTATTCGAGCGGCTCGAACCCGCCGTTCCAGTTCGCCCGATCCACGAGCGTGCTCGGCGGTTTCGAACAGCGCGACCTGGCGTTGATCAACGGCGCCGTGAAAGAGCGCGGACGCAAACGTTGCACCAGCGAAACCTGTGCCGGCGTCATCGCGCACAGTCGGACAGGTTACGACGCCGACGGCAATCCGACCGGCACCGTCGACTACCGCGGTGTCGTCACGGACTACGATTTCAGCAATCGCGGCCAGCAACTCGTGCAGCGTGAGAATTTTACCCAGCCTGCGAGTTGTCCGGCTCCGTCGACATTCAATCCGGACACCTACGGAACGATGTGTACCACCGGGACTTGCTGGTCGCCGGCACCGTTTCCGGGCAGCAGCAGTGGTGCGCCGCTGGGTTGGGGCAGCTGGCACTACAGCTGTCTGCAGCCGACCGGCCCGGCGACACAGTCGCGTTCGACGGAGACGGATTGGCACGCGACGTTCAACCTGCCGGTCGAACGCCGCGTGCGCAACGCAGCGAACGATCTGGAGTCGCGTACTCAATGGGTCTACAACACGCGTGGACAGGTGCTCGCCGAATGCGAGTTCGACGTCGGCAATGCGGCCGCGATGGCCTACGTCTGCAGCGCGACGACGGCACCGGCGGCGCCGGTTCCGGTCCGGCGCTGGACTTACGTCTACTGCGAGGCCGCGGACGTCACGGCGCCGAATTCGTCGTGTCCCGTGGTCGGTCTGCTGAGAACCTCCGATGGCCCACGTTCGCCGACCGAGGCAGGCATGAACGGGCAGGACGACGTCACGACGTACGCGTACTACCTGGCTACCGACGAATCCGGCTGCGACGTCGCCGGCGGCAACTGCCACCGCAAGGCGGACCTGCATACCGTGACCGATGCGCTCGGTCGCGTCAGTGAGCGCGTCGCCTACGACCGCAGCGGCCGCGTACGACGCATGCGGGATGCGAACGGCACGCTGACCGACAGTACCTACGACCTCCGAGGCCGGTTGCAGTCCACCACCGTACGCGGGCTGGCGAGCGGCGCGTCAGACCCCAGTGATGCGACGACGAGCTTCACCTACGACGCCGCCGGACAGATCGTACGCGTACAGCGCCCGGGCGGCGCATACCTGGACTACGACTACGACGACGCACACCGGCTCGTCGGGATCGCCGACAGCCTCGGCAACCGCATCCGCTACACACTGGACGCCGCCGGCAATCGGCTCAAGGAAGAAACATTCGACTCCAGCTACAATCCGGCGACTCCCGGCGTCGGGCTCAAGCGGTTGCTTTCGCGGGAATTCACTTCGCTCCGCCGCCTAGTGCGTGAACGTGATGCCGCCGACGCGATCACGCGCGACTCCTCGCCTTACGACAGCGGCGGTCTTCTCGACGGCTACGACGCGCACGGCAACGAGGTCGCGGTAAAGGATGGTCGCGGTATTGAGACGCGCCAGGAATACGACCCGCTCAATCGGCTCGTGAAAACGATCGAGGACTATGCTGGCAGCGACCCGGAGACTGCCGCATCGACCGTCGAATACACCTACGATACGCGCGACAACGTCCGTACGATCACCGATCCGGACGGCCTCGTCACGACATATACCTTCGATTCGCTCGACAACCAGACCTTGCTGTCGAGTCCCGATACCGGGCATACGGCCTTCGCGTACGATCGGGCCGGCAATCGCATCTCCCAGACCGACAACCGCGGTGTGGTGTCGGCCTATGTCTACGATGCGCTGAACCGGCTGGTACAGATCTCGTATCCGGCATCGTCGCTGGGCGTGAACGTCCACTACGACGAAAGCGATGCGATCACCGGATGCCCGGGCTCATTCCCGCTGGGACGGCTGACGCGGGTAACGGATTCGAGCGGAACGACGGTGCACTGCTATGATCGTCGCGGCAACGTTACGCGAAGGACGCATTCCCTCGGCAGCTCGGTACTCAGCGCGACGTTCACCTACACGCCGGCCGATCGCGTTGCGTCGATCACCTATCCGGGCGGTGGTATCGCGGGATACATCTACGACGAGAGCGGCCGCCCCAGCCAGCTGACCTGGAAAGCCAATGCGTCCGCGACGCCCGTCGCCGTCGTTACCGCTAGCCATTACCCGTTCGGTCCGCTCGCATCGTTGACCTACGGCAACGGCCGCACGCTGACGAAAATGCGTGACCAGAACTATGCGATCGACAGCGTGCTCAGCTCCGCCGCTGACGGTCTGGCGCTGCAGTTCGATGTCGGCGTGATGGGCAATATCGCTGGCGTAGACGGGGCCCTAGGTACCACGCCGGCGCAGCGGCGATATGTTCATGACAACCTTTACCGCATTACGCGAGTCGAGGACGCGACCGGAGCGCTGGTCGAAGACTACGGCTACAACCGTACCGGTGATCGCATGTCGAAACAGTTCGCCGGACAGCCTGCACAGGCGTATGCCTATCTGTCGGGCACGCATCGCCTGGCTGCGGTCGCGGGCACTGCGCGCAGCTACGATGCGAACGGCAACACGACTGGCCGCGGCGACGGCGTGTCGCTGGACTACGACGACCGCAACCGGCTGACGAGTGTCGTGGCGGCGACGGGAACGACCGGATACGACTATTCGGCGTTCGAGCAGCGTACACGCAAGCACACCGTCAGCGGGGCGACGACCAGCACCAGCCGCTACCTGCACGACGCCGACGGCCAGATCCTTGCCGAGCAGTCGCAGAGTGCCGGCGGCTCGCGTGGCACCTCAGTCTACCTGTTCCTCGGCACAACGCCGGTCGCGATCGTCCGGGGCACCGCCATGAGCTATCTGGAGAGCGACCACCTCGATACACCACGGGTCGCGGTCAATCCGGCGACGAATGCGGTGGAGTGGCGCTGGGATCTGCTGGGCAGCGCATTCGGCGAGCATGAGGCGGATACATTGGTGACCGGCAAAGGCGTTTCGCTGCGCTATCCCGGCCAGTATTTCGATGCGGAGACCGGTCTCAACCACAACTATCGTCGCGACTATGAGGCTTCGACGGGCCGCTACGTCGAAAGCGATCCGATTGGTCTCGAAGGTGCCTGGGCCACTTACGAATATGCCGGTTCGGCAGTGCTGGATTTCACCGATCCGGATGGACTCCTGCGGCGGCGCGGGTCCGGCGGCATGTCCTGCGGCGGTTCGGGGCTGGACGAATTGTATTGCCCTGATATGCCGGATACGTGCCACAACCGGTGCAGCTGCAAGCACCGCAAGGCGATAACCAAGTGCAAACCGTGGATTGTCTGGAAGTATTCGACGTGCCTGGAAGAGGCACGGCACGAATTGATCCGGTGTCTCGAAAGTTGTATCCCGCGAACGCCAGATTCTGACGGTTGA
PROTEIN sequence
Length: 1580
MLLALAAVIPGAVQAQLWECVASGGAAQCPRPETTDFACQGTFVNADSQPCSGIDSPGPKCKTEGEALDQAIDNYSQAPPPPCTRPSYGGLCPSVWNPVETEFDLGELYWIKHGYVQNIPSLTDGQCVTYSFPECGNHTVGDQFFGAIGNCLRRVYCPPGSARVGDVCKVARSKVCELGNPMDCVTGEKTQVERDIRAAGASPLEFVRYYSSSSFYEPRGSGAQNPDDHHHRILGPNWRHTYQRAIAPEPFVDGQPPVVTVLRHDGDYHYFRWIDGAWAGSTDEPEALRDIIKLGQRAGWEFRTASDEVEIYDLQGRLLAISYPTGEALKLLYSTIATPAAVAPFEGLLVRVEDSRGRALELQYDTLARLVRVIDAAGAVHEYQYSEGHALTGVTRPGGAVRSYLYNEPAHNLNYIAGTLLTGIVDENGDRYGTYRYSHSRVNDEWHGSDYADRLTITYSSGSNPPFQFARSTSVLGGFEQRDLALINGAVKERGRKRCTSETCAGVIAHSRTGYDADGNPTGTVDYRGVVTDYDFSNRGQQLVQRENFTQPASCPAPSTFNPDTYGTMCTTGTCWSPAPFPGSSSGAPLGWGSWHYSCLQPTGPATQSRSTETDWHATFNLPVERRVRNAANDLESRTQWVYNTRGQVLAECEFDVGNAAAMAYVCSATTAPAAPVPVRRWTYVYCEAADVTAPNSSCPVVGLLRTSDGPRSPTEAGMNGQDDVTTYAYYLATDESGCDVAGGNCHRKADLHTVTDALGRVSERVAYDRSGRVRRMRDANGTLTDSTYDLRGRLQSTTVRGLASGASDPSDATTSFTYDAAGQIVRVQRPGGAYLDYDYDDAHRLVGIADSLGNRIRYTLDAAGNRLKEETFDSSYNPATPGVGLKRLLSREFTSLRRLVRERDAADAITRDSSPYDSGGLLDGYDAHGNEVAVKDGRGIETRQEYDPLNRLVKTIEDYAGSDPETAASTVEYTYDTRDNVRTITDPDGLVTTYTFDSLDNQTLLSSPDTGHTAFAYDRAGNRISQTDNRGVVSAYVYDALNRLVQISYPASSLGVNVHYDESDAITGCPGSFPLGRLTRVTDSSGTTVHCYDRRGNVTRRTHSLGSSVLSATFTYTPADRVASITYPGGGIAGYIYDESGRPSQLTWKANASATPVAVVTASHYPFGPLASLTYGNGRTLTKMRDQNYAIDSVLSSAADGLALQFDVGVMGNIAGVDGALGTTPAQRRYVHDNLYRITRVEDATGALVEDYGYNRTGDRMSKQFAGQPAQAYAYLSGTHRLAAVAGTARSYDANGNTTGRGDGVSLDYDDRNRLTSVVAATGTTGYDYSAFEQRTRKHTVSGATTSTSRYLHDADGQILAEQSQSAGGSRGTSVYLFLGTTPVAIVRGTAMSYLESDHLDTPRVAVNPATNAVEWRWDLLGSAFGEHEADTLVTGKGVSLRYPGQYFDAETGLNHNYRRDYEASTGRYVESDPIGLEGAWATYEYAGSAVLDFTDPDGLLRRRGSGGMSCGGSGLDELYCPDMPDTCHNRCSCKHRKAITKCKPWIVWKYSTCLEEARHELIRCLESCIPRTPDSDG*