ggKbase home page

SCNpilot_BF_INOC_scaffold_1039_35

Organism: SCNpilot_BF_INOC_Bacteroidetes_43_41

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(25020..25628)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family id=4595836 bin=GWC2_Bacteroidetes_46_850 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 202.0
  • Bit_score: 220
  • Evalue 1.20e-54
transcriptional regulator Tax=GWC2_Bacteroidetes_46_850_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 202.0
  • Bit_score: 220
  • Evalue 1.70e-54
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 198.0
  • Bit_score: 211
  • Evalue 2.10e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Bacteroidetes_46_850_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 609
ATGAGCAGGCATCGGTTACATATCGCCATTATGGTGCATTCGCAGATTATTTATGAAGGATTGCACACGGTCCTCTCTCAATCGGAGATCGATTGCATAATTTGTAAAGTGGACTCATTAGACGACCTGGCAGATATCCTTCATTCAAAAAAAGTGGATCTGCTGATCATCAACCCGCTTTTATTGGTAAACAGGGAGAAGGAAGCAAGAAAAATTCGTAAAAATCATCCCGGCCTCTCCATCGTGGGAATTAACTTAAGCATTGTCGATAATCATTCGTTAGCGTTGCTCGACTCATCGTTTACCATTTTCGACACCGTAGAGCAGGTTTTGTCCAAACTGCAAAGAATAGGGATCGATAGTGAATTAAAAGCTCCGTCGAATGACGATAACCTGACCGACAGAGAACTCGATGTACTCACCCAATTGGTTCACGGTTATTCCAATAAGGAAATTGCCGATTCGCTCAATATCAGTATTCACACGGTAGTTACGCACCGGAAAAACATAACCTCCAAAACAGGTATCCGCAGCCAGTCCGGATTAACCATTTACGCCATCTCCAAACGGATTATTTCAATTGAAGATATAGATTTACAAAATCACTGA
PROTEIN sequence
Length: 203
MSRHRLHIAIMVHSQIIYEGLHTVLSQSEIDCIICKVDSLDDLADILHSKKVDLLIINPLLLVNREKEARKIRKNHPGLSIVGINLSIVDNHSLALLDSSFTIFDTVEQVLSKLQRIGIDSELKAPSNDDNLTDRELDVLTQLVHGYSNKEIADSLNISIHTVVTHRKNITSKTGIRSQSGLTIYAISKRIISIEDIDLQNH*