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SCNpilot_BF_INOC_scaffold_2303_2

Organism: SCNpilot_BF_INOC_Bacteroidetes_43_41

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 1555..2118

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YHD7_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 188.0
  • Bit_score: 160
  • Evalue 2.40e-36
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KKB57741.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 188.0
  • Bit_score: 160
  • Evalue 3.30e-36
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 189.0
  • Bit_score: 148
  • Evalue 1.50e-33

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 564
ATGCAGCAACGCGATGAATATTCTGAAGATGAAAGATTTAGCGAGAACAACGATAAATCTTTTCACCAATTATACATGAAATATTTCCCAAAAGTTAAATATTTCATCAATTATTTTGTCAAATCCGAAGCAATAGCAGAAGATTTGTCACAGGATATTTTTGAACATATTTGGATGAATAGAGAACGTTTTTTCCGATTGGCAAACTTGAATGCTTACCTATTTCGCATGGCAAAGAATTACTCGATTAATTACCTGCAAAGTAAAACAGTAGAAACAAATTACGCTTCTTTCTATTATTATATGAATTCTGCCGATTTGAAGGAATGCTTGACGGAAGAAGAAATTTATGCGAAAGAACTTGAATTGTTAATCCAATTGACCGTGGAAAGAATGCCAAAGCAACGACGCCGAATTTTTGAAATGAGCCGGATTAAAAACCTGAAAAATGCCGAAATAGCCGAAAAATTGAACATTTCCAAAAGAACGGTAGAAGTTCACTTAAACCTTGCCCTTAAGCAGATTCGGGAAGTAATCAGACTATCCTTTATTTTCTTTTTGTAA
PROTEIN sequence
Length: 188
MQQRDEYSEDERFSENNDKSFHQLYMKYFPKVKYFINYFVKSEAIAEDLSQDIFEHIWMNRERFFRLANLNAYLFRMAKNYSINYLQSKTVETNYASFYYYMNSADLKECLTEEEIYAKELELLIQLTVERMPKQRRRIFEMSRIKNLKNAEIAEKLNISKRTVEVHLNLALKQIREVIRLSFIFFL*