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SCNpilot_BF_INOC_scaffold_285_29

Organism: SCNpilot_BF_INOC_Bacteroidetes_43_41

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(33832..34401)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor id=1768552 bin=GWD2_Bacteroidales_45_23 species=Chryseobacterium gleum genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 186.0
  • Bit_score: 277
  • Evalue 1.30e-71
sigma-W factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Bacteroidetes_46_850_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 186.0
  • Bit_score: 277
  • Evalue 1.90e-71
Sigma-70 region 2 similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 186.0
  • Bit_score: 265
  • Evalue 8.70e-69

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Taxonomy

GWC2_Bacteroidetes_46_850_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 570
ATGATAAGAGAAGAAAACAGAGAGCAGGCCCTTCTTCAGCAAATTGTGCGCGGTAACACCATTGCCATGAAGGAGTTTTACGACATGTATTCGGGGTATCTTACCGCGGTATGCTCTCGTTACATATCTAATCAGGAGGATGTTAAGGATGTTCTACAGGAAAGTTTCATTAAAATATTCAAGGCTGTTGACCGGTTCGAATATAAGGGAGCGGGATCGTTAAAAGCGTGGTCGTCCCGCATTGTAGTAAATGAAGCGTTGAAACACATCAGGGAGAGCAATAAACTGAATATCACGAATCTGCCAAGCTGGGATTTGCCCGACATGGCCGACGACCGGGCGCCCGATTTCAATGATGTACCTACATCGGTTATCCTGGAAATGATTCGTAAACTCCCTTTGGGTTACCGGACCGTGTTCAACCTGTATGTTTTCGAGGAAAAAAGTCATAAAGAGATCGCTTCGATATTGGATATTGCGGAAAACACTTCGGCGTCGCAGTTACACAGGGCCAAAGGGCTGTTGATGCGGGAAATAGATTTGTATCGATTAAAAAAAATGGCACTATGA
PROTEIN sequence
Length: 190
MIREENREQALLQQIVRGNTIAMKEFYDMYSGYLTAVCSRYISNQEDVKDVLQESFIKIFKAVDRFEYKGAGSLKAWSSRIVVNEALKHIRESNKLNITNLPSWDLPDMADDRAPDFNDVPTSVILEMIRKLPLGYRTVFNLYVFEEKSHKEIASILDIAENTSASQLHRAKGLLMREIDLYRLKKMAL*