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SCNpilot_BF_INOC_scaffold_297_43

Organism: SCNpilot_BF_INOC_Bacteroidetes_43_41

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 51488..51994

Top 3 Functional Annotations

Value Algorithm Source
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 162.0
  • Bit_score: 152
  • Evalue 9.50e-35
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CEA14724.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 162.0
  • Bit_score: 152
  • Evalue 4.70e-34
Sigma-70 region 2 id=2666862 bin=GWC2_Bacteroidetes_46_850 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 163.0
  • Bit_score: 150
  • Evalue 1.30e-33

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Taxonomy

Porphyromonadaceae bacterium ING2-E5B → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 507
ATGAGCAATGACGAATTTAAAAAGCGTTTTTTATCCTTTCATCCATTGATTTATCGAATTTCGTACAGTATTCTCGAAAACCGGGATGACGCGGATGACGTTGCTCAGGAAGTCTATATAAAGCTCTGGGAACAGAGGAGCAATCTCGAAAATATCCGTAACGATGAAGCCTTTGTGGTAACAATGACCAAGAACTTATCAATCGATCTGCTCAGGAACAATCACCGCAAAACCACATCAATCATTGAAAACAAAGAGATGGTTTGCGAAAATCGGGAAGAAGAGAGAATGGATGCCCGCAACGAATTATCTCATTTGATGAAATGTATGAGCGATTTGCCGCAAGCGCAACAGGAAGTGATCAGGCTCAGGCACTTCGCCGATCTGTCGATCAGGGAGATTGCCGAAACAACCAGGCAGACTGAAACCAATATCCGGCAATTGTTATCGCGGGCAAGACGTGCAATGAAAGAAAAATTAAACAGAAACGGAAATGAATACAAATGA
PROTEIN sequence
Length: 169
MSNDEFKKRFLSFHPLIYRISYSILENRDDADDVAQEVYIKLWEQRSNLENIRNDEAFVVTMTKNLSIDLLRNNHRKTTSIIENKEMVCENREEERMDARNELSHLMKCMSDLPQAQQEVIRLRHFADLSIREIAETTRQTETNIRQLLSRARRAMKEKLNRNGNEYK*