ggKbase home page

SCNpilot_BF_INOC_scaffold_173

Search features with annotation key words

Displaying items 31-60 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_173_31
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(41205..41888)
DNA (684bp) protein (228aa)
Outer membrane transport energization protein ExbB n=1 Tax=uncultured bacterium RepID=K1Y585_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_173_32
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(41991..42995)
DNA (1005bp) protein (335aa)
Putative uncharacterized protein id=3839727 bin=GWF2_Bacteroidetes_41_31 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
pirin-like protein
Tax=BJP_IG2103_Bacteroidetes_37_22
SCNpilot_BF_INOC_scaffold_173_33
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(42997..44913)
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XPX2_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_173_34
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(44910..45983)
DNA (1074bp) protein (358aa)
Chromate transporter n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4APT3_MARSH
chromate transporter
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_173_35
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45995..48274)
DNA (2280bp) protein (760aa)
Glycoside hydrolase family 92 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FHD9_FLAJ1
Contig_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24283.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Fl
alpha-1,2-mannosidase
SCNpilot_BF_INOC_scaffold_173_36
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(48277..49080)
DNA (804bp) protein (268aa)
Putative uncharacterized protein id=4317295 bin=GWF2_Bacteroidetes_41_61 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_173_37
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(49094..50005)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y4H2_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_173_38
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(50002..51129)
DNA (1128bp) protein (376aa)
aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13] Tax=GWF2_Bacteroidetes_41_31_curated
hypothetical protein n=1 Tax=Eudoraea adriatica RepID=UPI00037CAF9C
aspartate racemase
SCNpilot_BF_INOC_scaffold_173_39
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(51140..51388)
DNA (249bp) protein (83aa)
Uncharacterized protein id=1852477 bin=GWE2_Bacteroidetes_39_28 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
Tax=BJP_IG2103_Bacteroidetes_41_9
SCNpilot_BF_INOC_scaffold_173_40
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51440..52795
DNA (1356bp) protein (452aa)
Multidrug export protein mepA n=1 Tax=Bacteroidales bacterium CF RepID=U5Q471_9BACT
hypothetical protein
Multidrug export protein mepA {ECO:0000313|EMBL:AGY53301.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
SCNpilot_BF_INOC_scaffold_173_41
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52798..53397
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:702 RepID=R5U5E6_9BACE
hypothetical protein Tax=RBG_13_Bacteroidetes_43_22_curated
hypothetical protein
SCNpilot_BF_INOC_scaffold_173_42
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(53394..54203)
DNA (810bp) protein (270aa)
Ion transport protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3L2_HALH1
Ion transport protein
Ion transport protein {ECO:0000313|EMBL:AEE53962.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter
SCNpilot_BF_INOC_scaffold_173_43
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54206..55789)
DNA (1584bp) protein (528aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G1G3_9SPHI
Transporter, small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:EEI90872.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphi
mechanosensitive ion channel protein MscS
SCNpilot_BF_INOC_scaffold_173_44
GWF2_TM6_33_332, TM6, Bacteria

Not on your lists

comp(55867..56043)
DNA (177bp) protein (59aa)
2Fe-2S iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:KKP51262.1}; TaxID=1619080 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_33_332.
2Fe-2S iron-sulfur cluster-binding domain protein id=4380715 bin=GWF2_Bacteroidetes_43_63 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
nitrite reductase-like protein
SCNpilot_BF_INOC_scaffold_173_45

Not on your lists

comp(56178..56942)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XNV4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD32180.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_173_46
Siansivirga zeaxanthinifaciens, Siansivirga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(56951..57721)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00037BD69E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJR04744.1}; TaxID=1454006 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Siansivirga.;" source="Siansivirga zeaxanthi
SCNpilot_BF_INOC_scaffold_173_47
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57730..58581)
DNA (852bp) protein (284aa)
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel id=4576008 bin=GWA2_Bacteroidetes_A19_40_15 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
mechanosensitive ion channel protein MscS; K03442 small conductance mechanosensitive channel Tax=GWA2_Bacteroidetes_40_15_curated
mechanosensitive ion channel protein MscS
SCNpilot_BF_INOC_scaffold_173_48
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(58581..60176)
DNA (1596bp) protein (532aa)
Putative uncharacterized protein id=2665841 bin=GWF2_Bacteroidetes_38_335 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
muiA; mucoidy inhibitor-like protein Tax=GWF2_Bacteroidetes_38_335_curated
muiA; mucoidy inhibitor-like protein
SCNpilot_BF_INOC_scaffold_173_49
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

Not on your lists

60363..60770
DNA (408bp) protein (136aa)
Glutamate mutase sigma subunit {ECO:0000256|HAMAP-Rule:MF_00526}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_00526};; Glutamate mutase S chain {ECO:0000256|HAMAP-Rule:MF_00526}; Glutamate mutase small sub
methylaspartate mutase, S subunit (EC:5.4.99.1)
Methylaspartate mutase S chain n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JFG8_9BACT
SCNpilot_BF_INOC_scaffold_173_50
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

60773..62155
DNA (1383bp) protein (461aa)
DNA mismatch repair protein mutL n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JFG7_9BACT
DNA mismatch repair protein MutL {ECO:0000313|EMBL:KGN78975.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" sourc
hypothetical protein
SCNpilot_BF_INOC_scaffold_173_51
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

62171..63622
DNA (1452bp) protein (484aa)
Glutamate mutase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_01923}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01923};; Glutamate mutase E chain {ECO:0000256|HAMAP-Rule:MF_01923}; Glutamate mutase large s
methylaspartate mutase subunit E (EC:5.4.99.1)
Methylaspartate mutase, E subunit n=2 Tax=Porphyromonas RepID=S4NFG3_9PORP
SCNpilot_BF_INOC_scaffold_173_52
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

Not on your lists

63640..64884
DNA (1245bp) protein (415aa)
methylaspartate ammonia-lyase (EC:4.3.1.2)
Methylaspartate ammonia-lyase n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JFG5_9BACT
Methylaspartate ammonia-lyase {ECO:0000313|EMBL:EFI17634.1}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
SCNpilot_BF_INOC_scaffold_173_53
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

64886..66256
DNA (1371bp) protein (457aa)
Lipoprotein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JFG4_9BACT
3-methylaspartate ammonia-lyase {ECO:0000313|EMBL:KGN79832.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source
PF07287 domain protein
SCNpilot_BF_INOC_scaffold_173_54
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

66272..66589
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZU91_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGJ71336.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011
PF14330 domain protein
SCNpilot_BF_INOC_scaffold_173_55
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

66604..67542
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZU92_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGJ71337.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011
hypothetical protein
SCNpilot_BF_INOC_scaffold_173_56
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

Not on your lists

67549..68391
DNA (843bp) protein (281aa)
Fumarate hydratase, alpha subunit n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JFF4_9BACT
Fumarate hydratase, alpha subunit {ECO:0000313|EMBL:EFI17623.1}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type
SCNpilot_BF_INOC_scaffold_173_57
Prevotella pallens, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

68422..68955
DNA (534bp) protein (178aa)
Fumarate hydratase beta subunit {ECO:0000313|EMBL:EGQ12619.1}; EC=4.2.1.2 {ECO:0000313|EMBL:EGQ12619.1};; TaxID=997353 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Pre
Fumarate hydratase beta subunit n=1 Tax=Prevotella pallens ATCC 700821 RepID=F9DM11_9BACT
fumarate hydratase I, C-terminal domain, beta subunit
SCNpilot_BF_INOC_scaffold_173_58
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(68946..69710)
DNA (765bp) protein (255aa)
tRNA pseudouridine synthase A n=1 Tax=uncultured bacterium RepID=K1YG44_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_173_59
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

69779..70771
DNA (993bp) protein (331aa)
ATPase associated with various cellular activities AAA_3 id=4175811 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
ATPase AAA
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_BF_INOC_scaffold_173_60
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

70773..71651
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XLN5_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
Displaying items 31-60 of 96 in total

View Taxonomy