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SCNpilot_BF_INOC_scaffold_30_53

Organism: SCNpilot_BF_INOC_Bacteroidetes_39_46

near complete RP 50 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 64768..65310

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 id=4656044 bin=GWF2_Bacteroidetes_40_14 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 179.0
  • Bit_score: 197
  • Evalue 9.80e-48
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWF2_Bacteroidetes_40_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 179.0
  • Bit_score: 197
  • Evalue 1.40e-47
putative RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 179.0
  • Bit_score: 178
  • Evalue 1.30e-42

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Taxonomy

GWF2_Bacteroidetes_40_14_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 543
ATGATTAGCGATCTGCTACTGTTAATCAGAACAAGGGAGGGGGATGTAAAAAGTTTTGAAATTCTTTTCAAGAGCTATTATCTCCCCCTTTTAAACTATTCAGCAACAATTACAGGCAGACGAGAGATTTCAGAGGAGATAGTACAGGAATTGTTCTACAATTTATGGCGTGAGAGGGAGCGGCTAAGCATAACAAAAAGTATTAAGAGCTATCTTTACAATTCAATTCGCAACAGATCCATTGATTACTGCAGAAGAAGAAAATTTGAGGAGAATTCATCAGATATACTGGAGAATATTAGTTCAGGCACATCATGGGAGAGCCCCCAGGAGAGGGCTGAGGCCGGAGAGATGGAGAGAATTATTAATCGCATACTTGCAAGGATGCCTGCTAGAAGAAGAGATATCTTCATGATGAACAGGGAGGGGAACAAAAAGTACGAAGAGATTGCCGCCATCCTCTCCTTATCAGTAAAAACAGTAGAGGCGGAGATGGCGAAAGCCCTAAAGGTGTTAAGAAAAGAGACAGGATACAGACGATGA
PROTEIN sequence
Length: 181
MISDLLLLIRTREGDVKSFEILFKSYYLPLLNYSATITGRREISEEIVQELFYNLWRERERLSITKSIKSYLYNSIRNRSIDYCRRRKFEENSSDILENISSGTSWESPQERAEAGEMERIINRILARMPARRRDIFMMNREGNKKYEEIAAILSLSVKTVEAEMAKALKVLRKETGYRR*