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SCNpilot_BF_INOC_scaffold_164

Search features with annotation key words

Displaying items 31-60 of 167 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_164_31
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34203..35420
DNA (1218bp) protein (406aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=391735 species="Bacteria
cysteine desulfurase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375024
cysteine desulfurase IscS
SCNpilot_BF_INOC_scaffold_164_32
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35402..35839
DNA (438bp) protein (146aa)
FeS cluster assembly scaffold IscU n=2 Tax=Acidovorax RepID=A1TPY1_ACIAC
iscU; Fe-S cluster assembly scaffold protein IscU; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
FeS cluster assembly scaffold IscU
SCNpilot_BF_INOC_scaffold_164_33
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35841..36581
DNA (741bp) protein (247aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:ADX46676.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ADX46676.1};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comam
DNA polymerase III, epsilon subunit n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q392_ACIAP
SCNpilot_BF_INOC_scaffold_164_34
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36793..39651)
DNA (2859bp) protein (953aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I066_9BURK
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:CDM25599.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Cas
SCNpilot_BF_INOC_scaffold_164_35
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39746..40798)
DNA (1053bp) protein (351aa)
dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
Dihydroorotate dehydrogenase (quinone) n=2 Tax=Alicycliphilus denitrificans RepID=E8U118_ALIDB
SCNpilot_BF_INOC_scaffold_164_36
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40835..41530
DNA (696bp) protein (232aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {E
ribose 5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X629_DELAC
SCNpilot_BF_INOC_scaffold_164_37
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41791..42471)
DNA (681bp) protein (227aa)
Glutaredoxin n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7S4_ACISJ
glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:GAD24167.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_BF_INOC_scaffold_164_38
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42584..44653)
DNA (2070bp) protein (690aa)
oligopeptidase A (EC:3.4.24.70)
oligopeptidase A n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F7B67
Zn-dependent oligopeptidases {ECO:0000313|EMBL:GAD24166.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
SCNpilot_BF_INOC_scaffold_164_39
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44650..45501)
DNA (852bp) protein (284aa)
methylenetetrahydrofolate dehydrogenase (nadp(+)) (EC:1.5.1.5)
Bifunctional protein FolD n=2 Tax=Alicycliphilus denitrificans RepID=E8U122_ALIDB
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
SCNpilot_BF_INOC_scaffold_164_40
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45573..46202)
DNA (630bp) protein (210aa)
LuxR family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037B5BEA
Two component LuxR family transcriptional regulator {ECO:0000313|EMBL:GAD24164.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" s
LuxR family two component transcriptional regulator
SCNpilot_BF_INOC_scaffold_164_41
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46214..48736)
DNA (2523bp) protein (841aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ac
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIU8_ACIET
pas/pac sensor signal transduction histidine kinase
SCNpilot_BF_INOC_scaffold_164_42
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48901..51600
DNA (2700bp) protein (900aa)
aceE; pyruvate dehydrogenase subunit e1 (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; C
Pyruvate dehydrogenase E1 component n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIU9_ACIET
SCNpilot_BF_INOC_scaffold_164_43
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51616..53259
DNA (1644bp) protein (548aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteo
dihydrolipoamide acetyltransferase n=1 Tax=Acidovorax avenae RepID=UPI00031EB859
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
SCNpilot_BF_INOC_scaffold_164_44
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53272..55071
DNA (1800bp) protein (600aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad
Dihydrolipoamide dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U127_ALIDB
dihydrolipoamide dehydrogenase
SCNpilot_BF_INOC_scaffold_164_45
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55128..55952)
DNA (825bp) protein (275aa)
UPI00039CB44C related cluster n=1 Tax=unknown RepID=UPI00039CB44C
Putative signal transduction protein {ECO:0000313|EMBL:GAD22132.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
signal transduction protein
SCNpilot_BF_INOC_scaffold_164_46
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56194..56421)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXC3_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG94258.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
SCNpilot_BF_INOC_scaffold_164_47
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56418..56987)
DNA (570bp) protein (190aa)
NUDIX hydrolase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCB7_ACIET
nudix hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACM33822.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY
SCNpilot_BF_INOC_scaffold_164_48
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56993..57898)
DNA (906bp) protein (302aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ac
Cysteine synthase B n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCB8_ACIET
cysM; cysteine synthase b
SCNpilot_BF_INOC_scaffold_164_49
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58509..58766)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum SD54 RepID=V4ZPT8_RALSL
Conjugal transfer protein {ECO:0000313|EMBL:KGH09987.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (
hypothetical protein
SCNpilot_BF_INOC_scaffold_164_50
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(58763..60055)
DNA (1293bp) protein (431aa)
TrbI-like protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8YQL3_PSEAI
Conjugal transfer protein TrbI {ECO:0000313|EMBL:KGE69514.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
conjugative transfer protein TrbI
SCNpilot_BF_INOC_scaffold_164_51
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60058..61047)
DNA (990bp) protein (330aa)
Conjugative transfer protein TrbG n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3EZQ9_STEMA
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:KGC11568.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei
conjugative transfer protein TrbG
SCNpilot_BF_INOC_scaffold_164_52
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61044..61748)
DNA (705bp) protein (235aa)
Conjugal transfer protein TrbF n=3 Tax=Pseudomonas aeruginosa RepID=U8EG63_PSEAI
Conjugal transfer protein TrbF {ECO:0000313|EMBL:KGE69516.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
conjugal transfer protein TrbF
SCNpilot_BF_INOC_scaffold_164_53
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61761..62936)
DNA (1176bp) protein (392aa)
P-type conjugative transfer protein TrbL n=1 Tax=Burkholderia pseudomallei MSHR346 RepID=C4KSG7_BURPE
trbL; P-type conjugative transfer protein TrbL
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:ACQ96415.1}; TaxID=536230 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomalle
SCNpilot_BF_INOC_scaffold_164_54
Pseudomonas monteilii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62933..63229)
DNA (297bp) protein (99aa)
UPI0003D6881E related cluster n=1 Tax=unknown RepID=UPI0003D6881E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHC89224.1}; TaxID=1435058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas monte
SCNpilot_BF_INOC_scaffold_164_55
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63241..63969)
DNA (729bp) protein (243aa)
P-type conjugative transfer protein TrbJ n=3 Tax=Pseudomonas aeruginosa RepID=U8EGU6_PSEAI
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KGE69519.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomona
conjugal transfer protein TrbJ
SCNpilot_BF_INOC_scaffold_164_56
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63966..66428)
DNA (2463bp) protein (821aa)
Conjugal transfer protein TrbE n=1 Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4UXD4_PSEAI
CagE, TrbE, VirB , component of type IV transporter system family protein {ECO:0000313|EMBL:KGC11472.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderi
ATPase
SCNpilot_BF_INOC_scaffold_164_57
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66444..66713)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa CF614 RepID=U8BKL0_PSEAI
Conjugal transfer protein TrbD {ECO:0000313|EMBL:AKC78380.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas ca
Conjugative transfer protein TrbD
SCNpilot_BF_INOC_scaffold_164_58
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66710..67093)
DNA (384bp) protein (128aa)
Conjugal transfer protein TrbC n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CHG5_ALCDB
conjugal transfer protein Trbc
Conjugal transfer protein TrbC {ECO:0000313|EMBL:AFT71066.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivor
SCNpilot_BF_INOC_scaffold_164_59
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67090..68112)
DNA (1023bp) protein (341aa)
P-type conjugative transfer ATPase TrbB n=2 Tax=Burkholderia multivorans RepID=B9BUE4_9BURK
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EEE05441.1}; TaxID=513052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia
conjugal transfer protein TrbB
SCNpilot_BF_INOC_scaffold_164_60
Pseudomonas monteilii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68109..68573)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8EGU1_PSEAI
CopG family transcripitonal regulator
CopG family transcripitonal regulator {ECO:0000313|EMBL:AHC89230.1}; TaxID=1435058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
Displaying items 31-60 of 167 in total

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