ggKbase home page

SCNpilot_BF_INOC_scaffold_90

Search features with annotation key words

Displaying items 121-150 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_90_121
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125408..126304)
DNA (897bp) protein (299aa)
UPI0003A97A66 related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003A97A66
NTP pyrophosphohydrolases including oxidative damage repair enzymes {ECO:0000313|EMBL:GAD22813.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
NUDIX hydrolase
SCNpilot_BF_INOC_scaffold_90_122
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126301..127284)
DNA (984bp) protein (328aa)
Alcohol dehydrogenase zinc-binding domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1M0_9BURK
Quinone oxidoreductase {ECO:0000313|EMBL:KJA11731.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
alcohol dehydrogenase zinc-binding domain-containing protein
SCNpilot_BF_INOC_scaffold_90_123
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127386..128291
DNA (906bp) protein (302aa)
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C694B
Uncharacterized protein {ECO:0000313|EMBL:GAD22815.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
SCNpilot_BF_INOC_scaffold_90_124
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128296..129633
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I0J0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44644.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.
SCNpilot_BF_INOC_scaffold_90_125
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129609..130256)
DNA (648bp) protein (216aa)
lytic transglycosylase catalytic subunit
lytic transglycosylase catalytic subunit id=12549993 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:GAD23230.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
SCNpilot_BF_INOC_scaffold_90_126
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(130253..132001)
DNA (1749bp) protein (583aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
prolyl-tRNA synthetase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000366ED7F
prolyl-tRNA synthetase
SCNpilot_BF_INOC_scaffold_90_127
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

132092..132787
DNA (696bp) protein (232aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hy
RNA pyrophosphohydrolase (EC:3.6.1.-)
RNA pyrophosphohydrolase n=1 Tax=Acidovorax sp. CF316 RepID=J1EKC4_9BURK
SCNpilot_BF_INOC_scaffold_90_128
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132807..133952)
DNA (1146bp) protein (382aa)
gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000255|HAMAP-Rule:MF_00456}; EC=2.7.2.11 {ECO:0000255|HAMAP-Rule:MF_00456};; Gamma-glutamyl kinase {ECO:0000255|HAMAP-Rule:MF_00456}; Short=GK {ECO:0000255|HAMAP-Rule:MF_00456
Glutamate 5-kinase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=PROB_ACIET
SCNpilot_BF_INOC_scaffold_90_129
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134016..135092)
DNA (1077bp) protein (359aa)
GTPase Obg n=2 Tax=Acidovorax sp. (strain JS42) RepID=OBG_ACISJ
obgE; GTPase ObgE
GTPase Obg {ECO:0000255|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000255|HAMAP-Rule:MF_01454}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonada
SCNpilot_BF_INOC_scaffold_90_130
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(135174..135440)
DNA (267bp) protein (89aa)
50S ribosomal protein L27 n=4 Tax=Comamonadaceae RepID=RL27_ACIET
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
SCNpilot_BF_INOC_scaffold_90_131
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(135458..135769)
DNA (312bp) protein (104aa)
UPI0003A5D8A8 related cluster n=1 Tax=unknown RepID=UPI0003A5D8A8
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidov
rplU; 50S ribosomal protein l21
SCNpilot_BF_INOC_scaffold_90_132
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135931..136914
DNA (984bp) protein (328aa)
octaprenyl diphosphate synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C1ABB
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:GAD23237.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
polyprenyl synthetase
SCNpilot_BF_INOC_scaffold_90_133
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

137185..137442
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000369B276
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADU98689.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus de
SCNpilot_BF_INOC_scaffold_90_134
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137598..138506)
DNA (909bp) protein (303aa)
UbiA prenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RBG_16_Gallionellales_56_9_curated
UbiA prenyltransferase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJI0_9GAMM
UbiA prenyltransferase
SCNpilot_BF_INOC_scaffold_90_135
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138510..139220)
DNA (711bp) protein (237aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64) Tax=RBG_16_Gallionellales_56_9_curated
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIC9_9GAMM
SCNpilot_BF_INOC_scaffold_90_136
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139198..140343)
DNA (1146bp) protein (382aa)
3-dehydroquinate synthetase (EC:4.2.3.4) Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
3-dehydroquinate synthetase (EC:4.2.3.4)
2-epi-5-epi-valiolone synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WKA7_9GAMM
SCNpilot_BF_INOC_scaffold_90_137
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140340..140843)
DNA (504bp) protein (168aa)
luxS; Autoinducer-2 production protein; K07173 S-ribosylhomocysteine lyase [EC:4.4.1.21] Tax=RBG_16_Gallionellales_56_9_curated
Autoinducer-2 production protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VJH7_9GAMM
luxS; Autoinducer-2 production protein
SCNpilot_BF_INOC_scaffold_90_138
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140847..142094)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WKA5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97125.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter t
sugar phosphate isomerase/epimerase
SCNpilot_BF_INOC_scaffold_90_139
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142306..143052)
DNA (747bp) protein (249aa)
Putative regulatory protein n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5Q4_HERAR
Nitric oxide-responding transcriptional regulator Dnr
Nitric oxide-responding transcriptional regulator Dnr {ECO:0000313|EMBL:CDM24022.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniell
SCNpilot_BF_INOC_scaffold_90_140
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143435..143857)
DNA (423bp) protein (141aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029, ECO:0000313|EMBL:KIL06583.1}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudom
arsC3; arsenate reductase (EC:1.20.4.1)
Arsenate reductase n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5L2E7_PSEAI
SCNpilot_BF_INOC_scaffold_90_141
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(143871..144953)
DNA (1083bp) protein (361aa)
Arsenical-resistance protein n=2 Tax=Comamonadaceae RepID=F4GGC2_ALIDK
arsenical-resistance protein
Arsenical-resistance protein {ECO:0000313|EMBL:AEB83992.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilu
SCNpilot_BF_INOC_scaffold_90_142
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144966..145079)
DNA (114bp) protein (38aa)
Glyoxalase-like domain protein n=1 Tax=Burkholderia multivorans ATCC BAA-247 RepID=J4SCW6_9BURK
glyoxalase
Glyoxalase {ECO:0000313|EMBL:AJW44612.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
SCNpilot_BF_INOC_scaffold_90_143
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145090..145419)
DNA (330bp) protein (110aa)
ArsR family transcriptional regulator n=18 Tax=Proteobacteria RepID=E7FJ93_9BURK
arsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AFK56625.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tis
SCNpilot_BF_INOC_scaffold_90_144
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145568..146821)
DNA (1254bp) protein (418aa)
acyl-CoA dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F3C09
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:GAD21651.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
acyl-CoA dehydrogenase domain-containing protein
SCNpilot_BF_INOC_scaffold_90_145
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146855..147940)
DNA (1086bp) protein (362aa)
Aminoglycoside phosphotransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6U1_ACISJ
aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ABM41966.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax s
SCNpilot_BF_INOC_scaffold_90_146
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148055..148774)
DNA (720bp) protein (240aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003817EFE
Crp/FNR family transcriptional regulator {ECO:0000313|EMBL:GAD21649.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acid
Crp/Fnr family transcriptional regulator
SCNpilot_BF_INOC_scaffold_90_147
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148839..149654)
DNA (816bp) protein (272aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GC80_ALIDK
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEB84739.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
SCNpilot_BF_INOC_scaffold_90_148
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149731..150402)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F7DA3
Pseudouridylate synthases, 23S RNA-specific {ECO:0000313|EMBL:GAD24176.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="A
rluA; uracil hydrolyase
SCNpilot_BF_INOC_scaffold_90_149
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150389..152590)
DNA (2202bp) protein (734aa)
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ56_ACIET
signal transduction histidine kinase, nitrogen specific, ntrb
Signal transduction histidine kinase, nitrogen specific, NtrB {ECO:0000313|EMBL:ACM33194.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidov
SCNpilot_BF_INOC_scaffold_90_150
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152701..153810
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000381A3B2
Uncharacterized protein {ECO:0000313|EMBL:GAD21458.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
Displaying items 121-150 of 152 in total

View Taxonomy