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SCNpilot_BF_INOC_scaffold_1620_4

Organism: SCNpilot_BF_INOC_Burkholderiales_65_44

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(3634..4896)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=285 species=" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 420.0
  • Bit_score: 775
  • Evalue 2.80e-221
Transcription termination factor Rho n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J225_COMT2 similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 420.0
  • Bit_score: 775
  • Evalue 2.00e-221
Ktermination factor Rho similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 420.0
  • Bit_score: 775
  • Evalue 5.70e-222

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGCACCTGAACGAATTGAAGGCCCTGCACGTCTCCGAAGTGCTCAAGCAGGCCGAAGAGCTCGGCGTCGAAAACGGCGGCCGCATGCGCAAGCAGGAGCTGATGTTCGCCATCATCAAGAAGCGCGCGAAAACCGGCGAGCAGGTCTTCGCCGACGGCGTGCTCGAAATCCTGCCCGACGGCTTCGGCTTCCTGCGCAGCCCCGACACCAGCTACACCGCCTCTACAGACGACATCTACATCAGCCCCAGCCAGGTGCGCCGCTTCAACCTGCACACCGGCGACATGATCGAGGGCGAGGTGCGCATCCCCAAGGACGGCGAGCGCTACTTTGCCCTCACCAAGCTCGACAAGGTCAACGGCGACCTGCCCGAGAAGAACAAGCACAAGGTGATGTTCGAGAACCTCACGCCGCTGTTCCCCAAGGAGCAGATGAAGCTGGAGCGCGACATCAAGGGTGAGGAAAACATCACCGGCCGCATCATCGACATCATCGCCCCCATCGGCCGCGGGCAGCGCGCGCTGATCGTCGCGCCGCCCAAGAGCGGCAAGACGGTGATGATGCAGAGCATCGCCCACGCCATCACCGCCAACTACCCCGACGTGACGCTGATGGTGCTGCTCGTCGATGAGCGCCCCGAGGAAGTGACCGAGATGCAGCGCTCGGTGCGCGGCGAGATCATCGCCTCGACCTTCGATGAACCGGCCACGCGCCACGTGCACGTCGCCGAGATGGTGATCGAGCGCGCCAAGCGCCTGGTCGAGCTCGGCAAGGACGTGGTCATCCTGCTCGACTCCCTCACGCGCCTGGCGCGCGCCTACAACAACGTCGTGCCGTCTTCCGGCAAGGTGCTCACCGGCGGCGTCGACTCCAACGCACTGCAGCGCCCCAAGCGCTTCTTCGGCGCGGCGCGCAACATCGAGGAAGGCGGCTCGCTCACCATCATCGCCACCGCGCTCGTCGATACCGGCAGCCGCATGGACGAGGTGATCTTCGAAGAGTTCAAGGGCACGGGCAACAGCGAGCTGCACCTGAACCGGCGCCTGTACGAGAAGCGCGTGTTCCCCGCGATCGAACTCAACAAGAGCGGCACGCGCCGCGAAGAGCTGCTGCTGGCACCCGAGATCCTGCAGAAGACCCGCATCCTGCGCCAGTTCATGTACAACATGGACGAGATCGAATCGATGGAGCTCATGATCAAGAAAATGCGCGAGACCAAGAGCAACGTCGATTTCTTCGAAGCCATGCGCCGGGGCGGCTGA
PROTEIN sequence
Length: 421
MHLNELKALHVSEVLKQAEELGVENGGRMRKQELMFAIIKKRAKTGEQVFADGVLEILPDGFGFLRSPDTSYTASTDDIYISPSQVRRFNLHTGDMIEGEVRIPKDGERYFALTKLDKVNGDLPEKNKHKVMFENLTPLFPKEQMKLERDIKGEENITGRIIDIIAPIGRGQRALIVAPPKSGKTVMMQSIAHAITANYPDVTLMVLLVDERPEEVTEMQRSVRGEIIASTFDEPATRHVHVAEMVIERAKRLVELGKDVVILLDSLTRLARAYNNVVPSSGKVLTGGVDSNALQRPKRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELHLNRRLYEKRVFPAIELNKSGTRREELLLAPEILQKTRILRQFMYNMDEIESMELMIKKMRETKSNVDFFEAMRRGG*