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SCNpilot_BF_INOC_scaffold_172_148

Organism: SCNpilot_BF_INOC_Burkholderiales_65_44

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: 150848..151477

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type transport system, small permease component n=1 Tax=Pseudomonas mendocina (strain NK-01) RepID=F4DQ76_PSEMN similarity UNIREF
DB: UNIREF100
  • Identity: 35.3
  • Coverage: 204.0
  • Bit_score: 130
  • Evalue 1.70e-27
TRAP-type transport system, small permease similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 204.0
  • Bit_score: 130
  • Evalue 4.80e-28
TRAP-type transport system, small permease component {ECO:0000313|EMBL:AEB56868.1}; TaxID=1001585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 35.3
  • Coverage: 204.0
  • Bit_score: 130
  • Evalue 2.40e-27

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Taxonomy

Pseudomonas mendocina → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGAACACAAGCGTGCAGTTCGTCACCGCAGTATCGCGATTTCTGGCTCGACTTGGAGGAGCGCTGATCCTCATCTGCGCCTTCCTGGTGTCGCTGGACGTCGTGTTCCGTAACGTCTTCAAGCTGGCCATCTTTGAAAGTTACGAGTTGACCGGTTACGGCATCGCACTGGCCACCGCGTTCGGCCTGTCCTGGGCGCTCGTCACCAAGGCGCACATCCGCATCGAGGTCATCTACAACCTGCTGGGCGTCAAGCCTCGCGCCTACCTGGACATATGCGCTCTGGCTGCGTTGTCGGTTGTCGCGACTGTGCTCGTCTACTACGGCGCGCTCGTCGCGTTGGACAACTGGGAACTGGGCGCGAGTTCCAATTCCACCCTGCATGTGCCGCTCGCCATCCCTCAAGGGCTATGGCTACTGGGCCTGTTTTGGTTTGCAGTGTGCGCCAGCGTGCTTCTGGTCGTGGCGGTGAGCGCAGTGGCACACAACCAGCACCAGCAGGTACAAGAAATGTTCGGTATCGCGACCGTATCGGAAGAGGTTGAAGCGTCCATGGAAGGGACCGGGGTACAAGTCACGCGCGCCACGTCCCCGGCCGGCTCTGTATCCGTTGCGAACGCCGGAGCCTGA
PROTEIN sequence
Length: 210
MNTSVQFVTAVSRFLARLGGALILICAFLVSLDVVFRNVFKLAIFESYELTGYGIALATAFGLSWALVTKAHIRIEVIYNLLGVKPRAYLDICALAALSVVATVLVYYGALVALDNWELGASSNSTLHVPLAIPQGLWLLGLFWFAVCASVLLVVAVSAVAHNQHQQVQEMFGIATVSEEVEASMEGTGVQVTRATSPAGSVSVANAGA*