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SCNpilot_BF_INOC_scaffold_166_43

Organism: SCNpilot_BF_INOC_Burkholderiales_65_44

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: 42443..43177

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CZ27_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 242.0
  • Bit_score: 194
  • Evalue 1.50e-46
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 242.0
  • Bit_score: 194
  • Evalue 4.10e-47
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACS20988.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 242.0
  • Bit_score: 194
  • Evalue 2.10e-46

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGAACGCTCCCACGATTCCCCCGGCTTGCGCGGCCGGCGAGGCGCCCCCCGGTATCGGGGCGGGCCATACCCGGTCAGCCATCCTGCTGGTGGATGACCATGAACTCGTCAGGCTCGGGTTCCGGGCGCTGGTGGCGGCGCAGACACGGCAGGCAGGCCTGGCCGCGATCACCGTGCACGAAGCCGGCACGCTGGCCCAGGCGCTGGCCATTCAGCAGGAGCACGACCAGGACATCGCGGTGGTGGTGCTGGACCTGTCGCTGACCGACAGCCGCGATCTGGACGGACTCATCGCCTTCCGCAAGGCCTGGCCGCTCGTGACCATCGTCGTGCTCTCGGGCACGGCCAGCGACACGGTGGCGCGCGACGCGCTGGCGCTGGGCGCCGCGGCCTTCTTTCCCAAATCGGGCAATCTTGGCGACATGCTGGACTTCGTGCAGGCCTGCGTGACGCACGGCGTGCAAAGCGCGAGCCAGCGCTTCACGCCCCCCTGGACCACGCTGACCAGTCTGTCCCAGGCCCAGCGTCAGTCGGACACACCGATCGGCAGCGCGCATCACCTGACCACGCGGCAGCTGCAGACGCTGCAGCTGGTGCTGCAAGGCAAGTCGAACCGGGAGATCGGCGAGCTGACCCACCTTTCGGAAGGCACGGTGAAAAACCACGTGTCGATGCTGTTGCTGACCTTTGGCGTGCGCTCGCGCTCGCAACTCATCAGCAAGATGCGCTCCTGA
PROTEIN sequence
Length: 245
MNAPTIPPACAAGEAPPGIGAGHTRSAILLVDDHELVRLGFRALVAAQTRQAGLAAITVHEAGTLAQALAIQQEHDQDIAVVVLDLSLTDSRDLDGLIAFRKAWPLVTIVVLSGTASDTVARDALALGAAAFFPKSGNLGDMLDFVQACVTHGVQSASQRFTPPWTTLTSLSQAQRQSDTPIGSAHHLTTRQLQTLQLVLQGKSNREIGELTHLSEGTVKNHVSMLLLTFGVRSRSQLISKMRS*