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SCNpilot_BF_INOC_scaffold_167_34

Organism: SCNpilot_BF_INOC_Burkholderiales_65_44

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(32987..33706)

Top 3 Functional Annotations

Value Algorithm Source
Putative ECF-family RNA polymerase sigma factor n=4 Tax=Bordetella RepID=K4QEG6_BORBO similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 233.0
  • Bit_score: 278
  • Evalue 7.60e-72
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 233.0
  • Bit_score: 278
  • Evalue 2.10e-72
Putative ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CCN22541.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 233.0
  • Bit_score: 278
  • Evalue 1.10e-71

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Taxonomy

Bordetella bronchiseptica → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGGACACGGCAAGCATCCAGCCCGCGGACACCGCCGAGAGCGCCACCGCGGCCAGCGACACCGAGCTGATCGCGCGTGCCATCGCGGGCAAGCGCCATGCCTTCGAGGCCATCATGCGTCGACACAACCAGCTGCTGTTTCGCACGGCGCGCTCCATCCTCAAGAGCGATCCCGAGGCCGAGGAAGCGGTGCAGGAGGCGTATCTGCAGGCCTGGCGCGCGCTGGCGACGTTTCGGGCCGACGCCAGGCTCTCCACCTGGCTCGTTCGCATCGTGGCCAACGAGGCGCTGGGGCGCCTTCGACGCAAGCACGGCGAGGTCATTCCCCTGGATGCGGCCATGCTGATCCCGGACCCCGACGTGCAGGCCCGTTTCACGGCCGACCCCAGCCAGCAACCCGAAGGAAAAGCCATGCGTGACGAACTTCGCAAAATTCTGGAAGAACGCATCGATGGCCTGCCCGACATCTACCGCACGGTTTTCGTGCTGCGCGCGGTGCAGGAACTGAGCGTGGAAGAAGTGGCGCACGCGCTGCAGATCCCCGAGCCCACGGTGCGCACGCGCTTTTTCCGCGCGCGCAGCCTGTTGCGCGAGGGGCTGGCGAGCGACATCGACGGCACCATGGGCCACGCGTTTTCCTTCGATGGCGAACGGTGCGACCGCCTCGTGGAGCACACGCTACGGCGCGCCACGCACGAAGGGCTGATCAACGCGGCCTGA
PROTEIN sequence
Length: 240
MDTASIQPADTAESATAASDTELIARAIAGKRHAFEAIMRRHNQLLFRTARSILKSDPEAEEAVQEAYLQAWRALATFRADARLSTWLVRIVANEALGRLRRKHGEVIPLDAAMLIPDPDVQARFTADPSQQPEGKAMRDELRKILEERIDGLPDIYRTVFVLRAVQELSVEEVAHALQIPEPTVRTRFFRARSLLREGLASDIDGTMGHAFSFDGERCDRLVEHTLRRATHEGLINAA*